Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL20A1Q9P218 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL20A1Q9P218 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL20A1Q9P218 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL20A1Q9P218 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL20A1Q9P218 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL20A1Q9P218 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.21■□□□□ 0.67
COL20A1Q9P218 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL20A1Q9P218 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL20A1Q9P218 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL20A1Q9P218 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL20A1Q9P218 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL20A1Q9P218 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL20A1Q9P218 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL20A1Q9P218 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL20A1Q9P218 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL20A1Q9P218 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL20A1Q9P218 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.21■□□□□ 0.67
COL20A1Q9P218 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL20A1Q9P218 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL20A1Q9P218 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL20A1Q9P218 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL20A1Q9P218 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL20A1Q9P218 AC131009.4-201ENST00000624048 1740 ntBASIC19.2■□□□□ 0.66
COL20A1Q9P218 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL20A1Q9P218 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL20A1Q9P218 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
COL20A1Q9P218 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL20A1Q9P218 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.2■□□□□ 0.66
COL20A1Q9P218 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
COL20A1Q9P218 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL20A1Q9P218 RNU1-129P-201ENST00000384064 167 ntBASIC19.2■□□□□ 0.66
COL20A1Q9P218 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
COL20A1Q9P218 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL20A1Q9P218 TFAMP1-201ENST00000412727 736 ntBASIC19.2■□□□□ 0.66
COL20A1Q9P218 HCG4-201ENST00000418983 998 ntBASIC19.2■□□□□ 0.66
COL20A1Q9P218 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.2■□□□□ 0.66
COL20A1Q9P218 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.2■□□□□ 0.66
COL20A1Q9P218 AC079140.1-201ENST00000508039 487 ntBASIC19.2■□□□□ 0.66
COL20A1Q9P218 AC109322.1-201ENST00000524499 1264 ntBASIC19.2■□□□□ 0.66
COL20A1Q9P218 U1.21-201ENST00000580816 167 ntBASIC19.2■□□□□ 0.66
COL20A1Q9P218 MIR4492-201ENST00000581627 80 ntBASIC19.2■□□□□ 0.66
COL20A1Q9P218 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.2■□□□□ 0.66
COL20A1Q9P218 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL20A1Q9P218 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL20A1Q9P218 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.2■□□□□ 0.66
COL20A1Q9P218 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL20A1Q9P218 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL20A1Q9P218 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL20A1Q9P218 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL20A1Q9P218 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL20A1Q9P218 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
COL20A1Q9P218 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.2■□□□□ 0.66
COL20A1Q9P218 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.19■□□□□ 0.66
COL20A1Q9P218 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
COL20A1Q9P218 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL20A1Q9P218 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL20A1Q9P218 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL20A1Q9P218 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL20A1Q9P218 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL20A1Q9P218 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL20A1Q9P218 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL20A1Q9P218 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL20A1Q9P218 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL20A1Q9P218 AC092474.2-201ENST00000424288 719 ntBASIC19.19■□□□□ 0.66
COL20A1Q9P218 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.19■□□□□ 0.66
COL20A1Q9P218 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.19■□□□□ 0.66
COL20A1Q9P218 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.19■□□□□ 0.66
COL20A1Q9P218 AL135744.1-201ENST00000565098 629 ntBASIC19.19■□□□□ 0.66
COL20A1Q9P218 RARRES2P8-201ENST00000566335 367 ntBASIC19.19■□□□□ 0.66
COL20A1Q9P218 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
COL20A1Q9P218 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL20A1Q9P218 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL20A1Q9P218 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.19■□□□□ 0.66
COL20A1Q9P218 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
COL20A1Q9P218 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL20A1Q9P218 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL20A1Q9P218 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COL20A1Q9P218 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COL20A1Q9P218 AC092068.3-201ENST00000587894 2016 ntBASIC19.18■□□□□ 0.66
COL20A1Q9P218 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
COL20A1Q9P218 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms