Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 AL512604.3-201ENST00000569583 964 ntBASIC16.61■□□□□ 0.25
NDE1Q9NXR1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDE1Q9NXR1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 NEK4P2-201ENST00000580004 1012 ntBASIC16.6■□□□□ 0.25
NDE1Q9NXR1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDE1Q9NXR1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.59■□□□□ 0.25
NDE1Q9NXR1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms