Protein–RNA interactions for Protein: Q9NRS6

SNX15, Sorting nexin-15, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX15Q9NRS6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 INTS4P1-201ENST00000438455 1935 ntBASIC17.03■□□□□ 0.32
SNX15Q9NRS6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX15Q9NRS6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 PMPCAP1-201ENST00000508114 1576 ntBASIC17.02■□□□□ 0.32
SNX15Q9NRS6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 TUBB8P12-201ENST00000308911 1335 ntBASIC17.02■□□□□ 0.32
SNX15Q9NRS6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 TUBB7P-202ENST00000428444 1305 ntBASIC17.02■□□□□ 0.32
SNX15Q9NRS6 KRT18P1-202ENST00000452408 1331 ntBASIC17.02■□□□□ 0.32
SNX15Q9NRS6 TUBB8P7-204ENST00000567960 1332 ntBASIC17.02■□□□□ 0.32
SNX15Q9NRS6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 AC096582.2-201ENST00000510860 516 ntBASIC17.02■□□□□ 0.32
SNX15Q9NRS6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 BNIP3P18-201ENST00000593976 575 ntBASIC17.02■□□□□ 0.32
SNX15Q9NRS6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNX15Q9NRS6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SNX15Q9NRS6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SNX15Q9NRS6 AC148477.5-201ENST00000625164 1645 ntBASIC17.02■□□□□ 0.31
SNX15Q9NRS6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX15Q9NRS6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.02■□□□□ 0.31
SNX15Q9NRS6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.02■□□□□ 0.31
SNX15Q9NRS6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SNX15Q9NRS6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
SNX15Q9NRS6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX15Q9NRS6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX15Q9NRS6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SNX15Q9NRS6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 NUS1P1-201ENST00000446295 882 ntBASIC17.01■□□□□ 0.31
SNX15Q9NRS6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 FAM86EP-206ENST00000510506 987 ntBASIC17.01■□□□□ 0.31
SNX15Q9NRS6 AP002490.2-201ENST00000524791 560 ntBASIC17.01■□□□□ 0.31
SNX15Q9NRS6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 Z69720.1-201ENST00000601483 472 ntBASIC17.01■□□□□ 0.31
SNX15Q9NRS6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.01■□□□□ 0.31
SNX15Q9NRS6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms