Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.05■□□□□ 0.48
CD248Q9HCU0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD248Q9HCU0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.05■□□□□ 0.48
CD248Q9HCU0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
CD248Q9HCU0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD248Q9HCU0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD248Q9HCU0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CD248Q9HCU0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD248Q9HCU0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD248Q9HCU0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.05■□□□□ 0.48
CD248Q9HCU0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CD248Q9HCU0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CD248Q9HCU0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD248Q9HCU0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD248Q9HCU0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CD248Q9HCU0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CD248Q9HCU0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CD248Q9HCU0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CD248Q9HCU0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CD248Q9HCU0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CD248Q9HCU0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.04■□□□□ 0.48
CD248Q9HCU0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CD248Q9HCU0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CD248Q9HCU0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.04■□□□□ 0.48
CD248Q9HCU0 PCDHA14-201ENST00000506751 2298 ntBASIC18.04■□□□□ 0.48
CD248Q9HCU0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CD248Q9HCU0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.04■□□□□ 0.48
CD248Q9HCU0 AC007967.3-201ENST00000434308 558 ntBASIC18.04■□□□□ 0.48
CD248Q9HCU0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CD248Q9HCU0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD248Q9HCU0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.04■□□□□ 0.48
CD248Q9HCU0 PGAM5P1-201ENST00000518923 814 ntBASIC18.04■□□□□ 0.48
CD248Q9HCU0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CD248Q9HCU0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CD248Q9HCU0 AL139288.1-201ENST00000623748 933 ntBASIC18.04■□□□□ 0.48
CD248Q9HCU0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.04■□□□□ 0.48
CD248Q9HCU0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CD248Q9HCU0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.04■□□□□ 0.48
CD248Q9HCU0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CD248Q9HCU0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.04■□□□□ 0.48
CD248Q9HCU0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD248Q9HCU0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.04■□□□□ 0.48
CD248Q9HCU0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD248Q9HCU0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.04■□□□□ 0.48
CD248Q9HCU0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CD248Q9HCU0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD248Q9HCU0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD248Q9HCU0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.04■□□□□ 0.48
CD248Q9HCU0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD248Q9HCU0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD248Q9HCU0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD248Q9HCU0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD248Q9HCU0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.03■□□□□ 0.48
CD248Q9HCU0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.03■□□□□ 0.48
CD248Q9HCU0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD248Q9HCU0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CD248Q9HCU0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD248Q9HCU0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD248Q9HCU0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD248Q9HCU0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CD248Q9HCU0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD248Q9HCU0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.03■□□□□ 0.48
CD248Q9HCU0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CD248Q9HCU0 KRT18P13-201ENST00000400056 1290 ntBASIC18.03■□□□□ 0.48
CD248Q9HCU0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CD248Q9HCU0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.03■□□□□ 0.48
CD248Q9HCU0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
CD248Q9HCU0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.03■□□□□ 0.48
CD248Q9HCU0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.03■□□□□ 0.48
CD248Q9HCU0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD248Q9HCU0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD248Q9HCU0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CD248Q9HCU0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CD248Q9HCU0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CD248Q9HCU0 GMCL1P1-201ENST00000463439 1581 ntBASIC18.03■□□□□ 0.48
CD248Q9HCU0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CD248Q9HCU0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.03■□□□□ 0.48
CD248Q9HCU0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.03■□□□□ 0.48
CD248Q9HCU0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.03■□□□□ 0.48
CD248Q9HCU0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CD248Q9HCU0 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.03■□□□□ 0.48
CD248Q9HCU0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
CD248Q9HCU0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CD248Q9HCU0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CD248Q9HCU0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CD248Q9HCU0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD248Q9HCU0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CD248Q9HCU0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CD248Q9HCU0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD248Q9HCU0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CD248Q9HCU0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CD248Q9HCU0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD248Q9HCU0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.02■□□□□ 0.48
CD248Q9HCU0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CD248Q9HCU0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.02■□□□□ 0.48
CD248Q9HCU0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.02■□□□□ 0.48
CD248Q9HCU0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD248Q9HCU0 RPS2P28-201ENST00000314255 741 ntBASIC18.02■□□□□ 0.48
CD248Q9HCU0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.02■□□□□ 0.48
CD248Q9HCU0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms