Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 HTR7P1-202ENST00000624664 4411 ntBASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 PCDHB17P-201ENST00000539533 2393 ntBASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 DDT-206ENST00000430101 573 ntTSL 2 BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 AP005117.1-201ENST00000584346 1413 ntBASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 AC015922.1-201ENST00000421102 1152 ntBASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 SLC25A6P5-201ENST00000435663 894 ntBASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 AC020910.4-201ENST00000612269 540 ntBASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
SCAF1Q9H7N4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 HOXB1-202ENST00000577092 1414 ntBASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 HLA-V-201ENST00000429037 534 ntBASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 AL590133.2-202ENST00000561111 642 ntTSL 3 BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 AL078644.1-201ENST00000609881 752 ntBASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 LINC00602-201ENST00000629776 2065 ntBASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC25.6■■□□□ 1.69
SCAF1Q9H7N4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SCAF1Q9H7N4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC25.59■■□□□ 1.69
SCAF1Q9H7N4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SCAF1Q9H7N4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SCAF1Q9H7N4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC25.59■■□□□ 1.69
SCAF1Q9H7N4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SCAF1Q9H7N4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SCAF1Q9H7N4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC25.59■■□□□ 1.69
SCAF1Q9H7N4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC25.59■■□□□ 1.69
SCAF1Q9H7N4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SCAF1Q9H7N4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
SCAF1Q9H7N4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC25.59■■□□□ 1.69
SCAF1Q9H7N4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC25.59■■□□□ 1.69
SCAF1Q9H7N4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
SCAF1Q9H7N4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC25.59■■□□□ 1.69
SCAF1Q9H7N4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
SCAF1Q9H7N4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC25.59■■□□□ 1.69
SCAF1Q9H7N4 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC25.59■■□□□ 1.69
SCAF1Q9H7N4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SCAF1Q9H7N4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms