Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 AP002490.2-201ENST00000524791 560 ntBASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 AC092068.3-201ENST00000587894 2016 ntBASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 AC007967.3-201ENST00000434308 558 ntBASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 AC079776.4-201ENST00000511039 504 ntBASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 GUSBP12-201ENST00000513727 720 ntBASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXP3Q9BZS1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 KRT16P4-201ENST00000453883 522 ntBASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 AC006449.5-201ENST00000610658 2098 ntBASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms