Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
PACSIN1Q9BY11 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PACSIN1Q9BY11 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
PACSIN1Q9BY11 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PACSIN1Q9BY11 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PACSIN1Q9BY11 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PACSIN1Q9BY11 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PACSIN1Q9BY11 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.21■□□□□ 0.51
PACSIN1Q9BY11 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
PACSIN1Q9BY11 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
PACSIN1Q9BY11 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.21■□□□□ 0.5
PACSIN1Q9BY11 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 AL391256.1-201ENST00000443260 1855 ntBASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 MIR3180-1-201ENST00000580374 94 ntBASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 MIR3180-3-201ENST00000584616 94 ntBASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.2■□□□□ 0.5
PACSIN1Q9BY11 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 AC074051.2-201ENST00000565115 352 ntBASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 ALOX12P2-203ENST00000570921 1945 ntBASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PACSIN1Q9BY11 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACSIN1Q9BY11 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACSIN1Q9BY11 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACSIN1Q9BY11 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PACSIN1Q9BY11 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
PACSIN1Q9BY11 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.18■□□□□ 0.5
PACSIN1Q9BY11 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms