Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 AC254562.1-201ENST00000417586 456 ntBASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 MIR4469-201ENST00000583919 79 ntBASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 AC023141.13-201ENST00000604991 943 ntBASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 ELL2P1-201ENST00000413990 1906 ntBASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAIPQ9BWF2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 ACTG1P14-201ENST00000446382 1122 ntBASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 AC074386.1-202ENST00000463561 864 ntBASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 AC025580.3-201ENST00000617932 1424 ntBASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 BCAR1-209ENST00000546196 1340 ntBASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAIPQ9BWF2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.71■□□□□ 0.58
TRAIPQ9BWF2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 RPS8P6-201ENST00000426177 609 ntBASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 PKD1P1-201ENST00000458669 6805 ntBASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 AC108860.2-201ENST00000562760 2183 ntBASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAIPQ9BWF2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAIPQ9BWF2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAIPQ9BWF2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAIPQ9BWF2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAIPQ9BWF2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAIPQ9BWF2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAIPQ9BWF2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
TRAIPQ9BWF2 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAIPQ9BWF2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
TRAIPQ9BWF2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
TRAIPQ9BWF2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAIPQ9BWF2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAIPQ9BWF2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.69■□□□□ 0.58
TRAIPQ9BWF2 PMS2P2-201ENST00000425039 1128 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms