Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 RPS29-206ENST00000557111 488 ntTSL 2 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 MIR1199-201ENST00000621445 119 ntBASIC11.96□□□□□ -0.49
UPK3BQ9BT76 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 AC116407.3-201ENST00000623905 1129 ntBASIC11.96□□□□□ -0.49
UPK3BQ9BT76 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
UPK3BQ9BT76 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
UPK3BQ9BT76 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
UPK3BQ9BT76 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
UPK3BQ9BT76 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
UPK3BQ9BT76 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
UPK3BQ9BT76 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
UPK3BQ9BT76 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
UPK3BQ9BT76 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
UPK3BQ9BT76 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
UPK3BQ9BT76 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC11.96□□□□□ -0.5
UPK3BQ9BT76 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
UPK3BQ9BT76 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
UPK3BQ9BT76 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
UPK3BQ9BT76 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
UPK3BQ9BT76 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
UPK3BQ9BT76 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
UPK3BQ9BT76 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 AC103702.1-201ENST00000548801 2630 ntBASIC11.95□□□□□ -0.5
UPK3BQ9BT76 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 EML3-212ENST00000494176 2901 ntTSL 2 BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 KRT18P27-201ENST00000427733 1299 ntBASIC11.95□□□□□ -0.5
UPK3BQ9BT76 PMS2P1-201ENST00000431037 1228 ntBASIC11.95□□□□□ -0.5
UPK3BQ9BT76 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 CD63-204ENST00000546939 779 ntTSL 3 BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 AC145285.3-201ENST00000564603 959 ntBASIC11.95□□□□□ -0.5
UPK3BQ9BT76 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 COPE-211ENST00000600932 1144 ntTSL 5 BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 AL049840.3-201ENST00000602669 611 ntBASIC11.95□□□□□ -0.5
UPK3BQ9BT76 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
UPK3BQ9BT76 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms