Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 AL359075.1-203ENST00000462729 1002 ntBASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 AC092597.1-201ENST00000487352 616 ntBASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CMSS1Q9BQ75 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 MIR662-201ENST00000384847 95 ntBASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 AC010203.1-204ENST00000548782 407 ntBASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 AC011558.1-201ENST00000623459 338 ntBASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CMSS1Q9BQ75 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 AC092053.1-201ENST00000605787 1936 ntBASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms