Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NPAS1Q99742 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NPAS1Q99742 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS1Q99742 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
NPAS1Q99742 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS1Q99742 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS1Q99742 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NPAS1Q99742 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS1Q99742 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
NPAS1Q99742 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.61■□□□□ 0.09
NPAS1Q99742 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NPAS1Q99742 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS1Q99742 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.61■□□□□ 0.09
NPAS1Q99742 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.61■□□□□ 0.09
NPAS1Q99742 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS1Q99742 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS1Q99742 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.61■□□□□ 0.09
NPAS1Q99742 LAGE3P1-201ENST00000425356 484 ntBASIC15.61■□□□□ 0.09
NPAS1Q99742 AC079776.4-201ENST00000511039 504 ntBASIC15.61■□□□□ 0.09
NPAS1Q99742 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.61■□□□□ 0.09
NPAS1Q99742 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.61■□□□□ 0.09
NPAS1Q99742 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.61■□□□□ 0.09
NPAS1Q99742 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.61■□□□□ 0.09
NPAS1Q99742 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NPAS1Q99742 AC008735.5-201ENST00000623544 497 ntBASIC15.61■□□□□ 0.09
NPAS1Q99742 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
NPAS1Q99742 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS1Q99742 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS1Q99742 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.61■□□□□ 0.09
NPAS1Q99742 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.61■□□□□ 0.09
NPAS1Q99742 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.61■□□□□ 0.09
NPAS1Q99742 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS1Q99742 AC060834.1-201ENST00000443027 2032 ntBASIC15.61■□□□□ 0.09
NPAS1Q99742 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS1Q99742 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.61■□□□□ 0.09
NPAS1Q99742 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS1Q99742 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
NPAS1Q99742 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NPAS1Q99742 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS1Q99742 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS1Q99742 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS1Q99742 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS1Q99742 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.61■□□□□ 0.09
NPAS1Q99742 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NPAS1Q99742 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS1Q99742 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.6■□□□□ 0.09
NPAS1Q99742 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS1Q99742 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.6■□□□□ 0.09
NPAS1Q99742 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS1Q99742 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS1Q99742 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS1Q99742 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS1Q99742 AC022211.2-201ENST00000585075 2527 ntBASIC15.6■□□□□ 0.09
NPAS1Q99742 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS1Q99742 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS1Q99742 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
NPAS1Q99742 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
NPAS1Q99742 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
NPAS1Q99742 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS1Q99742 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.6■□□□□ 0.09
NPAS1Q99742 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS1Q99742 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS1Q99742 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
NPAS1Q99742 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.6■□□□□ 0.09
NPAS1Q99742 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.6■□□□□ 0.09
NPAS1Q99742 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.6■□□□□ 0.09
NPAS1Q99742 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.6■□□□□ 0.09
NPAS1Q99742 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS1Q99742 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.6■□□□□ 0.09
NPAS1Q99742 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.6■□□□□ 0.09
NPAS1Q99742 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.6■□□□□ 0.09
NPAS1Q99742 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.6■□□□□ 0.09
NPAS1Q99742 AP001005.1-201ENST00000571755 1248 ntBASIC15.6■□□□□ 0.09
NPAS1Q99742 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.6■□□□□ 0.09
NPAS1Q99742 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.6■□□□□ 0.09
NPAS1Q99742 AC116407.3-201ENST00000623905 1129 ntBASIC15.6■□□□□ 0.09
NPAS1Q99742 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.6■□□□□ 0.09
NPAS1Q99742 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
NPAS1Q99742 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS1Q99742 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS1Q99742 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS1Q99742 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.6■□□□□ 0.09
NPAS1Q99742 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NPAS1Q99742 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.6■□□□□ 0.09
NPAS1Q99742 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS1Q99742 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.6■□□□□ 0.09
NPAS1Q99742 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.6■□□□□ 0.09
NPAS1Q99742 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS1Q99742 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS1Q99742 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
NPAS1Q99742 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NPAS1Q99742 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NPAS1Q99742 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
NPAS1Q99742 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.59■□□□□ 0.09
NPAS1Q99742 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS1Q99742 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.59■□□□□ 0.09
NPAS1Q99742 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.59■□□□□ 0.09
NPAS1Q99742 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS1Q99742 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS1Q99742 EGFEM1P-202ENST00000431685 1563 ntBASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms