Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 AC093525.9-201ENST00000624961 1746 ntBASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 SPDYE12P-201ENST00000618416 771 ntBASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 AC022144.1-201ENST00000602255 1580 ntBASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CRAMP1Q96RY5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 AL354751.1-201ENST00000412768 1863 ntBASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 HLA-J-202ENST00000469281 1241 ntBASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 AL596325.1-201ENST00000563991 1082 ntBASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 AC003101.2-201ENST00000612557 442 ntBASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 AL138828.2-201ENST00000615812 383 ntBASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 AL021920.2-201ENST00000624828 1351 ntBASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CRAMP1Q96RY5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 NME2P1-201ENST00000426182 414 ntBASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 HLA-V-204ENST00000476601 1289 ntBASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 KRT18P34-201ENST00000488218 1270 ntBASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 FRMD8P1-201ENST00000440433 1524 ntBASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.68■□□□□ 0.9
CRAMP1Q96RY5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms