Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACAP3Q96P50 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.52■□□□□ 0.56
ACAP3Q96P50 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.52■□□□□ 0.56
ACAP3Q96P50 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.52■□□□□ 0.56
ACAP3Q96P50 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
ACAP3Q96P50 AC004877.2-201ENST00000623941 599 ntBASIC18.52■□□□□ 0.56
ACAP3Q96P50 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.52■□□□□ 0.56
ACAP3Q96P50 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.52■□□□□ 0.56
ACAP3Q96P50 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACAP3Q96P50 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ACAP3Q96P50 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ACAP3Q96P50 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ACAP3Q96P50 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.52■□□□□ 0.55
ACAP3Q96P50 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
ACAP3Q96P50 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.52■□□□□ 0.55
ACAP3Q96P50 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACAP3Q96P50 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACAP3Q96P50 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ACAP3Q96P50 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACAP3Q96P50 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACAP3Q96P50 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ACAP3Q96P50 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACAP3Q96P50 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACAP3Q96P50 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACAP3Q96P50 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACAP3Q96P50 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.51■□□□□ 0.55
ACAP3Q96P50 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.51■□□□□ 0.55
ACAP3Q96P50 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.51■□□□□ 0.55
ACAP3Q96P50 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.51■□□□□ 0.55
ACAP3Q96P50 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.51■□□□□ 0.55
ACAP3Q96P50 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.51■□□□□ 0.55
ACAP3Q96P50 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.51■□□□□ 0.55
ACAP3Q96P50 AC007064.4-201ENST00000637740 555 ntBASIC18.51■□□□□ 0.55
ACAP3Q96P50 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACAP3Q96P50 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACAP3Q96P50 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ACAP3Q96P50 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ACAP3Q96P50 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACAP3Q96P50 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACAP3Q96P50 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACAP3Q96P50 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACAP3Q96P50 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACAP3Q96P50 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
ACAP3Q96P50 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ACAP3Q96P50 BCAR1-209ENST00000546196 1340 ntBASIC18.5■□□□□ 0.55
ACAP3Q96P50 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ACAP3Q96P50 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
ACAP3Q96P50 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACAP3Q96P50 PKD1P1-201ENST00000458669 6805 ntBASIC18.5■□□□□ 0.55
ACAP3Q96P50 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ACAP3Q96P50 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ACAP3Q96P50 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.5■□□□□ 0.55
ACAP3Q96P50 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ACAP3Q96P50 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.5■□□□□ 0.55
ACAP3Q96P50 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACAP3Q96P50 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.5■□□□□ 0.55
ACAP3Q96P50 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.5■□□□□ 0.55
ACAP3Q96P50 DNAJB3-201ENST00000446806 729 ntBASIC18.5■□□□□ 0.55
ACAP3Q96P50 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.5■□□□□ 0.55
ACAP3Q96P50 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.5■□□□□ 0.55
ACAP3Q96P50 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.5■□□□□ 0.55
ACAP3Q96P50 MTDHP5-201ENST00000598980 586 ntBASIC18.5■□□□□ 0.55
ACAP3Q96P50 AC023141.13-201ENST00000604991 943 ntBASIC18.5■□□□□ 0.55
ACAP3Q96P50 AL513190.1-201ENST00000621254 727 ntBASIC18.5■□□□□ 0.55
ACAP3Q96P50 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACAP3Q96P50 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ACAP3Q96P50 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.5■□□□□ 0.55
ACAP3Q96P50 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.5■□□□□ 0.55
ACAP3Q96P50 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ACAP3Q96P50 AC012313.1-201ENST00000593393 3059 ntBASIC18.5■□□□□ 0.55
ACAP3Q96P50 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.5■□□□□ 0.55
ACAP3Q96P50 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACAP3Q96P50 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ACAP3Q96P50 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ACAP3Q96P50 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACAP3Q96P50 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACAP3Q96P50 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACAP3Q96P50 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACAP3Q96P50 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ACAP3Q96P50 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.49■□□□□ 0.55
ACAP3Q96P50 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACAP3Q96P50 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACAP3Q96P50 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACAP3Q96P50 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACAP3Q96P50 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.49■□□□□ 0.55
ACAP3Q96P50 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACAP3Q96P50 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.49■□□□□ 0.55
ACAP3Q96P50 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ACAP3Q96P50 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ACAP3Q96P50 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.49■□□□□ 0.55
ACAP3Q96P50 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.49■□□□□ 0.55
ACAP3Q96P50 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ACAP3Q96P50 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACAP3Q96P50 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.49■□□□□ 0.55
ACAP3Q96P50 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.49■□□□□ 0.55
ACAP3Q96P50 ACTL9-202ENST00000612068 1252 ntBASIC18.49■□□□□ 0.55
ACAP3Q96P50 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.49■□□□□ 0.55
ACAP3Q96P50 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
ACAP3Q96P50 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.49■□□□□ 0.55
ACAP3Q96P50 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms