Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 KRT8P47-201ENST00000604727 1398 ntBASIC15.49■□□□□ 0.07
LRRC46Q96FV0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 AC134043.2-201ENST00000624206 2238 ntBASIC15.48■□□□□ 0.07
LRRC46Q96FV0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 AP002414.3-201ENST00000589352 1468 ntBASIC15.48■□□□□ 0.07
LRRC46Q96FV0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.48■□□□□ 0.07
LRRC46Q96FV0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 AC092183.1-201ENST00000469884 875 ntBASIC15.48■□□□□ 0.07
LRRC46Q96FV0 AC108751.1-201ENST00000490852 363 ntBASIC15.48■□□□□ 0.07
LRRC46Q96FV0 IGHV3-52-201ENST00000519770 353 ntBASIC15.48■□□□□ 0.07
LRRC46Q96FV0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 NCF1C-201ENST00000438382 1427 ntBASIC15.48■□□□□ 0.07
LRRC46Q96FV0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC46Q96FV0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.47■□□□□ 0.07
LRRC46Q96FV0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 KLF4P1-201ENST00000412782 1185 ntBASIC15.47■□□□□ 0.07
LRRC46Q96FV0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 AC004832.2-201ENST00000426397 482 ntBASIC15.47■□□□□ 0.07
LRRC46Q96FV0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 AC010327.4-202ENST00000591484 748 ntBASIC15.47■□□□□ 0.07
LRRC46Q96FV0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.47■□□□□ 0.07
LRRC46Q96FV0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms