Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX1Q92499 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX1Q92499 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX1Q92499 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX1Q92499 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX1Q92499 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX1Q92499 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX1Q92499 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX1Q92499 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.19■□□□□ 0.5
DDX1Q92499 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.19■□□□□ 0.5
DDX1Q92499 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
DDX1Q92499 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
DDX1Q92499 AC021087.4-201ENST00000563761 564 ntBASIC18.19■□□□□ 0.5
DDX1Q92499 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX1Q92499 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX1Q92499 MIR3687-2-201ENST00000577708 61 ntBASIC18.19■□□□□ 0.5
DDX1Q92499 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
DDX1Q92499 MIR3687-1-201ENST00000614492 61 ntBASIC18.19■□□□□ 0.5
DDX1Q92499 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
DDX1Q92499 AC004706.3-202ENST00000621574 984 ntBASIC18.19■□□□□ 0.5
DDX1Q92499 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX1Q92499 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX1Q92499 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
DDX1Q92499 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
DDX1Q92499 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX1Q92499 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX1Q92499 AL645728.1-201ENST00000366221 2101 ntBASIC18.19■□□□□ 0.5
DDX1Q92499 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX1Q92499 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
DDX1Q92499 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DDX1Q92499 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX1Q92499 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX1Q92499 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
DDX1Q92499 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX1Q92499 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.18■□□□□ 0.5
DDX1Q92499 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX1Q92499 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.18■□□□□ 0.5
DDX1Q92499 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.18■□□□□ 0.5
DDX1Q92499 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.18■□□□□ 0.5
DDX1Q92499 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX1Q92499 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.18■□□□□ 0.5
DDX1Q92499 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX1Q92499 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.18■□□□□ 0.5
DDX1Q92499 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
DDX1Q92499 MIR3197-201ENST00000582241 73 ntBASIC18.18■□□□□ 0.5
DDX1Q92499 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.18■□□□□ 0.5
DDX1Q92499 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DDX1Q92499 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
DDX1Q92499 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX1Q92499 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX1Q92499 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX1Q92499 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX1Q92499 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX1Q92499 AC243591.1-201ENST00000452967 1364 ntBASIC18.17■□□□□ 0.5
DDX1Q92499 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX1Q92499 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX1Q92499 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX1Q92499 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.17■□□□□ 0.5
DDX1Q92499 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX1Q92499 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX1Q92499 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX1Q92499 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.17■□□□□ 0.5
DDX1Q92499 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX1Q92499 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX1Q92499 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX1Q92499 AC073648.2-201ENST00000510116 352 ntBASIC18.17■□□□□ 0.5
DDX1Q92499 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX1Q92499 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX1Q92499 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.17■□□□□ 0.5
DDX1Q92499 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX1Q92499 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
DDX1Q92499 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX1Q92499 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.17■□□□□ 0.5
DDX1Q92499 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX1Q92499 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX1Q92499 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
DDX1Q92499 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX1Q92499 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms