Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 AC091607.1-201ENST00000490318 1060 ntBASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 AC022188.1-201ENST00000620960 1664 ntBASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A1Q8WWI5 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 KRT8P26-201ENST00000534154 1276 ntBASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
SLC44A1Q8WWI5 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 ALOX12P2-203ENST00000570921 1945 ntBASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 AC008894.3-201ENST00000624324 3103 ntBASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 AC022616.7-201ENST00000525383 220 ntBASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms