Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 ACTG1P14-201ENST00000446382 1122 ntBASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 RFPL4AP1-201ENST00000530883 850 ntBASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 AC068137.2-201ENST00000605408 478 ntBASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 AC087163.2-201ENST00000457299 853 ntBASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 AP002472.1-201ENST00000577490 586 ntBASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHKBP1Q8TBC3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 AC092919.2-201ENST00000623631 1645 ntBASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 AL513480.1-201ENST00000451731 511 ntBASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 CYMP-203ENST00000474680 1263 ntBASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 LINC00304-203ENST00000565008 1864 ntBASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHKBP1Q8TBC3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms