Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 RBM17P2-201ENST00000616397 1405 ntBASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 FES-204ENST00000414248 2327 ntTSL 2 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 NME1-207ENST00000480143 964 ntTSL 2 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 AL023775.1-201ENST00000454907 1746 ntBASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 AC126177.1-201ENST00000547829 2218 ntBASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 AC117489.1-201ENST00000625169 3217 ntBASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 AL391807.1-203ENST00000604392 2365 ntBASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms