Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC107918.2-201ENST00000530817 355 ntBASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 TUBB8P12-201ENST00000308911 1335 ntBASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 TUBB7P-202ENST00000428444 1305 ntBASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 TUBB8P7-204ENST00000567960 1332 ntBASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 FAM185BP-201ENST00000443595 716 ntBASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 KRT18P3-201ENST00000451602 1288 ntBASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 RNA5SP416-201ENST00000516838 111 ntBASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 AL671883.3-201ENST00000603274 991 ntBASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 TOP3BP1-201ENST00000420768 1380 ntBASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 KRT8P49-201ENST00000604166 1432 ntBASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAM1L1Q8N609 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 AC096734.2-201ENST00000562054 433 ntBASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
TRAM1L1Q8N609 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 AC060834.1-201ENST00000443027 2032 ntBASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 AC092068.3-201ENST00000587894 2016 ntBASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms