Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.54■□□□□ 0.4
ATPAF2Q8N5M1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 AL160237.2-201ENST00000556165 472 ntBASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 AC092068.3-201ENST00000587894 2016 ntBASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 AC006504.4-201ENST00000592118 1568 ntBASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 AC243591.1-201ENST00000452967 1364 ntBASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF2Q8N5M1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 AC022211.2-201ENST00000585075 2527 ntBASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 RPS2P28-201ENST00000314255 741 ntBASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 AC104692.2-201ENST00000603054 253 ntBASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 AL773604.1-201ENST00000617417 272 ntBASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 AC008735.5-201ENST00000623544 497 ntBASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 AC148477.8-201ENST00000624298 468 ntBASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATPAF2Q8N5M1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ATPAF2Q8N5M1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATPAF2Q8N5M1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
ATPAF2Q8N5M1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATPAF2Q8N5M1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
ATPAF2Q8N5M1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATPAF2Q8N5M1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.52■□□□□ 0.39
ATPAF2Q8N5M1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.51■□□□□ 0.39
ATPAF2Q8N5M1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATPAF2Q8N5M1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
ATPAF2Q8N5M1 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.51■□□□□ 0.39
ATPAF2Q8N5M1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.51■□□□□ 0.39
ATPAF2Q8N5M1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATPAF2Q8N5M1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms