Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 AC063926.3-201ENST00000624734 5658 ntBASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 LINC00554-201ENST00000564841 3011 ntBASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 AL136038.4-201ENST00000603606 1261 ntBASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 AC092171.3-201ENST00000610122 2651 ntBASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 LINC02199-201ENST00000506655 2702 ntBASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 MIR1224-201ENST00000408193 85 ntBASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 AL391807.1-203ENST00000604392 2365 ntBASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM42Q8IWZ5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 TCAF2P1-201ENST00000291129 2421 ntBASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms