Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 AL603756.1-201ENST00000606511 2163 ntBASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 ABCD1P5-201ENST00000445663 754 ntBASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 AC138894.3-201ENST00000603787 634 ntBASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 AC093458.2-201ENST00000623150 629 ntBASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC83Q8IWF9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 ACTG1P4-201ENST00000425123 1122 ntBASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CCDC83Q8IWF9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 ARMC10P1-201ENST00000313754 855 ntBASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 AC091076.1-201ENST00000610741 619 ntBASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 AL645728.1-201ENST00000366221 2101 ntBASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms