Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC079781.4-201ENST00000641908 219 ntBASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC60Q8IWA6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 AC026471.1-201ENST00000564629 3026 ntBASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 AC254562.1-201ENST00000417586 456 ntBASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 AC140658.5-201ENST00000438532 169 ntBASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC60Q8IWA6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC60Q8IWA6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC60Q8IWA6 AL353732.1-201ENST00000569618 1459 ntBASIC18.9■□□□□ 0.62
CCDC60Q8IWA6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC60Q8IWA6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC60Q8IWA6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC60Q8IWA6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC60Q8IWA6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC60Q8IWA6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.9■□□□□ 0.62
CCDC60Q8IWA6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC60Q8IWA6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC60Q8IWA6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC60Q8IWA6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC60Q8IWA6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC60Q8IWA6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC60Q8IWA6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC60Q8IWA6 ADH5P3-201ENST00000433842 1137 ntBASIC18.9■□□□□ 0.62
CCDC60Q8IWA6 ACTG1P14-201ENST00000446382 1122 ntBASIC18.9■□□□□ 0.62
CCDC60Q8IWA6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.9■□□□□ 0.62
CCDC60Q8IWA6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms