Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 AL162274.1-201ENST00000617191 1098 ntBASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 COX11-210ENST00000639671 696 ntBASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 AC135050.7-201ENST00000624508 2218 ntBASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 GIMAP3P-201ENST00000495150 836 ntBASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 SPDYE18-201ENST00000510091 1050 ntBASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 AC104794.3-201ENST00000566840 1248 ntBASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 AL138918.1-201ENST00000568306 659 ntBASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 KRT18P55-202ENST00000578578 1546 ntBASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 DFFBP1-201ENST00000433250 979 ntBASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 BNIP3P42-201ENST00000454982 569 ntBASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 PACS1-203ENST00000524815 628 ntTSL 4 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 BNIP3P29-201ENST00000598302 571 ntBASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 AC011447.5-201ENST00000616168 564 ntBASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 AL645728.2-201ENST00000641974 660 ntBASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 AL031055.1-201ENST00000606362 631 ntBASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 TEX28P1-201ENST00000613479 1221 ntBASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 TEX28P2-201ENST00000617764 1221 ntBASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 AL133338.1-201ENST00000565695 1517 ntBASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 ANKRD19P-201ENST00000338192 862 ntBASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS13BQ7Z7G8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms