Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AL138828.2-201ENST00000615812 383 ntBASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 HLA-V-204ENST00000476601 1289 ntBASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 AC073389.1-201ENST00000595595 795 ntBASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.22■□□□□ 0.51
CNKSR3Q6P9H4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 AC007274.1-201ENST00000439805 662 ntBASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 SPTLC1P1-201ENST00000447199 261 ntBASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 KRT18P34-201ENST00000488218 1270 ntBASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNKSR3Q6P9H4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 AL359881.2-201ENST00000602973 570 ntBASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 AC009113.1-201ENST00000570267 2443 ntBASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 AL355312.1-201ENST00000407115 2176 ntBASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CNKSR3Q6P9H4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms