Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 AC003669.1-201ENST00000334569 611 ntBASIC17.49■□□□□ 0.39
CASC4Q6P4E1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 AC116407.4-201ENST00000623319 1061 ntBASIC17.49■□□□□ 0.39
CASC4Q6P4E1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 EGFEM1P-202ENST00000431685 1563 ntBASIC17.49■□□□□ 0.39
CASC4Q6P4E1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 LINC00265-3P-201ENST00000447588 903 ntBASIC17.48■□□□□ 0.39
CASC4Q6P4E1 TOB2P1-201ENST00000469761 992 ntBASIC17.48■□□□□ 0.39
CASC4Q6P4E1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 AP002414.4-201ENST00000589764 1148 ntBASIC17.48■□□□□ 0.39
CASC4Q6P4E1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 AC073592.5-201ENST00000624854 528 ntBASIC17.48■□□□□ 0.39
CASC4Q6P4E1 AL590326.2-201ENST00000625139 305 ntBASIC17.48■□□□□ 0.39
CASC4Q6P4E1 AC132938.5-201ENST00000624980 1813 ntBASIC17.48■□□□□ 0.39
CASC4Q6P4E1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 IER3-202ENST00000376377 1350 ntBASIC17.48■□□□□ 0.39
CASC4Q6P4E1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.48■□□□□ 0.39
CASC4Q6P4E1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms