Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 LINC00982-205ENST00000420957 435 ntBASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 AC008608.2-201ENST00000606089 416 ntBASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 AL355877.3-201ENST00000622820 899 ntBASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 AC060834.1-201ENST00000443027 2032 ntBASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 NCF1C-201ENST00000438382 1427 ntBASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 CLEC4GP1-201ENST00000596555 870 ntBASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.55■□□□□ 0.24
HIST2H2AA3Q6FI13 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 REXO1L6P-202ENST00000619970 1078 ntBASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST2H2AA3Q6FI13 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms