Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LPCAT4Q643R3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LPCAT4Q643R3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LPCAT4Q643R3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.17■□□□□ 0.18
LPCAT4Q643R3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
LPCAT4Q643R3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LPCAT4Q643R3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LPCAT4Q643R3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LPCAT4Q643R3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LPCAT4Q643R3 AC006538.1-201ENST00000567905 1585 ntBASIC16.17■□□□□ 0.18
LPCAT4Q643R3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LPCAT4Q643R3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LPCAT4Q643R3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.17■□□□□ 0.18
LPCAT4Q643R3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LPCAT4Q643R3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LPCAT4Q643R3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 ME2P1-201ENST00000426028 1970 ntBASIC16.15■□□□□ 0.18
LPCAT4Q643R3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 RN7SL471P-201ENST00000580476 299 ntBASIC16.15■□□□□ 0.18
LPCAT4Q643R3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT4Q643R3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
LPCAT4Q643R3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms