Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 CR383656.12-201ENST00000549567 513 ntBASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 BX323043.1-201ENST00000641006 1765 ntBASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.66■□□□□ 0.26
LYSMD4Q5XG99 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 AL662799.1-202ENST00000614205 422 ntBASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 AC025048.6-201ENST00000634326 1161 ntBASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 SLC22A20-204ENST00000530038 1673 ntBASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD4Q5XG99 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LYSMD4Q5XG99 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 AC100757.3-201ENST00000622361 1406 ntBASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 AC004233.3-201ENST00000607794 1269 ntBASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LYSMD4Q5XG99 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms