Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 MIR662-201ENST00000384847 95 ntBASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 STARP1-201ENST00000397973 869 ntBASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 GPR89P-201ENST00000407924 1495 ntBASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00242Q5T6M2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 AL391256.1-201ENST00000443260 1855 ntBASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 AL049757.1-201ENST00000616842 1596 ntBASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 ANKRD20A18P-201ENST00000359341 492 ntBASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 AC092597.1-201ENST00000487352 616 ntBASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 AC122714.2-201ENST00000502787 707 ntBASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 AL441883.1-201ENST00000566170 1045 ntBASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 AL645728.1-201ENST00000366221 2101 ntBASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
LINC00242Q5T6M2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms