Protein–RNA interactions for Protein: Q53TQ3

INO80D, INO80 complex subunit D, humanhuman

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
INO80DQ53TQ3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
INO80DQ53TQ3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 AL671883.3-201ENST00000603274 991 ntBASIC17.31■□□□□ 0.36
INO80DQ53TQ3 AC140113.2-201ENST00000604370 208 ntBASIC17.31■□□□□ 0.36
INO80DQ53TQ3 AC064836.3-201ENST00000607928 673 ntBASIC17.31■□□□□ 0.36
INO80DQ53TQ3 REXO1L3P-201ENST00000622202 1288 ntBASIC17.31■□□□□ 0.36
INO80DQ53TQ3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
INO80DQ53TQ3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 MED15P5-201ENST00000423150 992 ntBASIC17.3■□□□□ 0.36
INO80DQ53TQ3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 FAM185BP-201ENST00000443595 716 ntBASIC17.3■□□□□ 0.36
INO80DQ53TQ3 KRT18P3-201ENST00000451602 1288 ntBASIC17.3■□□□□ 0.36
INO80DQ53TQ3 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.3■□□□□ 0.36
INO80DQ53TQ3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 DUX4L17-201ENST00000557360 1267 ntBASIC17.3■□□□□ 0.36
INO80DQ53TQ3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
INO80DQ53TQ3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
INO80DQ53TQ3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
INO80DQ53TQ3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms