Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 AC080080.1-201ENST00000625121 2420 ntBASIC20.57■□□□□ 0.88
RFX7Q2KHR2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 ADH5P3-201ENST00000433842 1137 ntBASIC20.57■□□□□ 0.88
RFX7Q2KHR2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 AC107918.2-201ENST00000530817 355 ntBASIC20.57■□□□□ 0.88
RFX7Q2KHR2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 AC027796.2-201ENST00000575326 344 ntBASIC20.57■□□□□ 0.88
RFX7Q2KHR2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 AL355385.1-201ENST00000606123 409 ntBASIC20.57■□□□□ 0.88
RFX7Q2KHR2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFX7Q2KHR2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX7Q2KHR2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.56■□□□□ 0.88
RFX7Q2KHR2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RFX7Q2KHR2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.56■□□□□ 0.88
RFX7Q2KHR2 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.56■□□□□ 0.88
RFX7Q2KHR2 AL021920.2-201ENST00000624828 1351 ntBASIC20.56■□□□□ 0.88
RFX7Q2KHR2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFX7Q2KHR2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFX7Q2KHR2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.56■□□□□ 0.88
RFX7Q2KHR2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RFX7Q2KHR2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.56■□□□□ 0.88
RFX7Q2KHR2 AP002490.2-201ENST00000524791 560 ntBASIC20.56■□□□□ 0.88
RFX7Q2KHR2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.56■□□□□ 0.88
RFX7Q2KHR2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.56■□□□□ 0.88
RFX7Q2KHR2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX7Q2KHR2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.56■□□□□ 0.88
RFX7Q2KHR2 AC092068.3-201ENST00000587894 2016 ntBASIC20.56■□□□□ 0.88
RFX7Q2KHR2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.56■□□□□ 0.88
RFX7Q2KHR2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.56■□□□□ 0.88
RFX7Q2KHR2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 METTL21AP1-201ENST00000438852 635 ntBASIC20.55■□□□□ 0.88
RFX7Q2KHR2 CXCL1P1-201ENST00000502804 216 ntBASIC20.55■□□□□ 0.88
RFX7Q2KHR2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 AL596442.2-201ENST00000610240 980 ntBASIC20.55■□□□□ 0.88
RFX7Q2KHR2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 AC091812.2-201ENST00000619081 385 ntBASIC20.55■□□□□ 0.88
RFX7Q2KHR2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 PI4KAP1-204ENST00000612579 1703 ntBASIC20.55■□□□□ 0.88
RFX7Q2KHR2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 LINC00895-201ENST00000629028 1637 ntBASIC20.55■□□□□ 0.88
RFX7Q2KHR2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX7Q2KHR2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 AC025580.3-201ENST00000617932 1424 ntBASIC20.54■□□□□ 0.88
RFX7Q2KHR2 AC105020.1-201ENST00000435356 2205 ntBASIC20.54■□□□□ 0.88
RFX7Q2KHR2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 TOP3BP1-201ENST00000420768 1380 ntBASIC20.54■□□□□ 0.88
RFX7Q2KHR2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms