Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B3Q16720 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.91■□□□□ 0.94
ATP2B3Q16720 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B3Q16720 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B3Q16720 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B3Q16720 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.91■□□□□ 0.94
ATP2B3Q16720 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B3Q16720 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.91■□□□□ 0.94
ATP2B3Q16720 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ATP2B3Q16720 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.91■□□□□ 0.94
ATP2B3Q16720 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.91■□□□□ 0.94
ATP2B3Q16720 REXO1L3P-201ENST00000622202 1288 ntBASIC20.91■□□□□ 0.94
ATP2B3Q16720 C20orf181-201ENST00000623918 480 ntBASIC20.91■□□□□ 0.94
ATP2B3Q16720 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.91■□□□□ 0.94
ATP2B3Q16720 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B3Q16720 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ATP2B3Q16720 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B3Q16720 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B3Q16720 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B3Q16720 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B3Q16720 PCDHA12-202ENST00000613593 2588 ntBASIC20.91■□□□□ 0.94
ATP2B3Q16720 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
ATP2B3Q16720 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP2B3Q16720 PP12613-201ENST00000424958 2230 ntBASIC20.9■□□□□ 0.94
ATP2B3Q16720 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B3Q16720 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ATP2B3Q16720 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
ATP2B3Q16720 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B3Q16720 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B3Q16720 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B3Q16720 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
ATP2B3Q16720 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B3Q16720 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.9■□□□□ 0.94
ATP2B3Q16720 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.9■□□□□ 0.94
ATP2B3Q16720 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP2B3Q16720 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP2B3Q16720 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B3Q16720 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B3Q16720 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.9■□□□□ 0.94
ATP2B3Q16720 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.9■□□□□ 0.94
ATP2B3Q16720 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B3Q16720 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B3Q16720 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.9■□□□□ 0.94
ATP2B3Q16720 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B3Q16720 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B3Q16720 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.9■□□□□ 0.94
ATP2B3Q16720 AC074386.1-202ENST00000463561 864 ntBASIC20.9■□□□□ 0.94
ATP2B3Q16720 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.9■□□□□ 0.94
ATP2B3Q16720 AC005829.1-201ENST00000570002 483 ntBASIC20.9■□□□□ 0.94
ATP2B3Q16720 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
ATP2B3Q16720 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.9■□□□□ 0.94
ATP2B3Q16720 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B3Q16720 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.9■□□□□ 0.94
ATP2B3Q16720 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B3Q16720 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B3Q16720 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B3Q16720 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
ATP2B3Q16720 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B3Q16720 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B3Q16720 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B3Q16720 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.89■□□□□ 0.94
ATP2B3Q16720 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B3Q16720 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B3Q16720 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B3Q16720 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.89■□□□□ 0.93
ATP2B3Q16720 AC004967.1-201ENST00000453589 447 ntBASIC20.89■□□□□ 0.93
ATP2B3Q16720 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.89■□□□□ 0.93
ATP2B3Q16720 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.89■□□□□ 0.93
ATP2B3Q16720 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.89■□□□□ 0.93
ATP2B3Q16720 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B3Q16720 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.89■□□□□ 0.93
ATP2B3Q16720 AC134684.3-201ENST00000641758 218 ntBASIC20.89■□□□□ 0.93
ATP2B3Q16720 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B3Q16720 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
ATP2B3Q16720 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B3Q16720 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B3Q16720 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B3Q16720 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B3Q16720 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B3Q16720 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B3Q16720 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.88■□□□□ 0.93
ATP2B3Q16720 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.88■□□□□ 0.93
ATP2B3Q16720 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ATP2B3Q16720 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B3Q16720 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ATP2B3Q16720 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B3Q16720 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B3Q16720 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B3Q16720 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ATP2B3Q16720 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.88■□□□□ 0.93
ATP2B3Q16720 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B3Q16720 HTR5BP-201ENST00000430851 1154 ntBASIC20.88■□□□□ 0.93
ATP2B3Q16720 YBX1P5-201ENST00000509441 847 ntBASIC20.88■□□□□ 0.93
ATP2B3Q16720 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ATP2B3Q16720 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ATP2B3Q16720 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.88■□□□□ 0.93
ATP2B3Q16720 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.88■□□□□ 0.93
ATP2B3Q16720 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.88■□□□□ 0.93
ATP2B3Q16720 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B3Q16720 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms