Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSRP1Q08945 AC009053.2-201ENST00000563701 2365 ntBASIC19.84■□□□□ 0.77
SSRP1Q08945 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSRP1Q08945 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSRP1Q08945 HNRNPDP1-201ENST00000439535 754 ntBASIC19.84■□□□□ 0.77
SSRP1Q08945 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSRP1Q08945 AF186996.4-201ENST00000467186 377 ntBASIC19.84■□□□□ 0.77
SSRP1Q08945 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.84■□□□□ 0.77
SSRP1Q08945 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.84■□□□□ 0.77
SSRP1Q08945 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SSRP1Q08945 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSRP1Q08945 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.84■□□□□ 0.77
SSRP1Q08945 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.84■□□□□ 0.77
SSRP1Q08945 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SSRP1Q08945 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.84■□□□□ 0.77
SSRP1Q08945 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSRP1Q08945 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSRP1Q08945 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSRP1Q08945 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SSRP1Q08945 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.84■□□□□ 0.77
SSRP1Q08945 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSRP1Q08945 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSRP1Q08945 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSRP1Q08945 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
SSRP1Q08945 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.84■□□□□ 0.77
SSRP1Q08945 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSRP1Q08945 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSRP1Q08945 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSRP1Q08945 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSRP1Q08945 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SSRP1Q08945 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSRP1Q08945 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SSRP1Q08945 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SSRP1Q08945 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SSRP1Q08945 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSRP1Q08945 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSRP1Q08945 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SSRP1Q08945 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSRP1Q08945 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSRP1Q08945 PTCHD3P3-201ENST00000403073 906 ntBASIC19.83■□□□□ 0.77
SSRP1Q08945 ELK2BP-201ENST00000415014 1224 ntBASIC19.83■□□□□ 0.77
SSRP1Q08945 KRT18P67-201ENST00000432816 1264 ntBASIC19.83■□□□□ 0.77
SSRP1Q08945 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.83■□□□□ 0.77
SSRP1Q08945 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.83■□□□□ 0.77
SSRP1Q08945 AC018712.1-201ENST00000455767 687 ntBASIC19.83■□□□□ 0.77
SSRP1Q08945 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.83■□□□□ 0.77
SSRP1Q08945 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.83■□□□□ 0.77
SSRP1Q08945 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.83■□□□□ 0.77
SSRP1Q08945 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.83■□□□□ 0.77
SSRP1Q08945 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.83■□□□□ 0.77
SSRP1Q08945 TERC-201ENST00000602385 541 ntBASIC19.83■□□□□ 0.77
SSRP1Q08945 AC104692.2-201ENST00000603054 253 ntBASIC19.83■□□□□ 0.77
SSRP1Q08945 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SSRP1Q08945 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.83■□□□□ 0.77
SSRP1Q08945 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SSRP1Q08945 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SSRP1Q08945 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SSRP1Q08945 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SSRP1Q08945 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.83■□□□□ 0.76
SSRP1Q08945 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SSRP1Q08945 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SSRP1Q08945 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SSRP1Q08945 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SSRP1Q08945 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SSRP1Q08945 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SSRP1Q08945 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSRP1Q08945 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSRP1Q08945 AC106886.4-201ENST00000623557 2502 ntBASIC19.82■□□□□ 0.76
SSRP1Q08945 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSRP1Q08945 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.82■□□□□ 0.76
SSRP1Q08945 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSRP1Q08945 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SSRP1Q08945 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SSRP1Q08945 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.82■□□□□ 0.76
SSRP1Q08945 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.82■□□□□ 0.76
SSRP1Q08945 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.82■□□□□ 0.76
SSRP1Q08945 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.82■□□□□ 0.76
SSRP1Q08945 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.82■□□□□ 0.76
SSRP1Q08945 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.82■□□□□ 0.76
SSRP1Q08945 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.82■□□□□ 0.76
SSRP1Q08945 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.82■□□□□ 0.76
SSRP1Q08945 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.82■□□□□ 0.76
SSRP1Q08945 AC148477.8-201ENST00000624298 468 ntBASIC19.82■□□□□ 0.76
SSRP1Q08945 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSRP1Q08945 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.82■□□□□ 0.76
SSRP1Q08945 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSRP1Q08945 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSRP1Q08945 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SSRP1Q08945 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SSRP1Q08945 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.82■□□□□ 0.76
SSRP1Q08945 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.82■□□□□ 0.76
SSRP1Q08945 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSRP1Q08945 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.82■□□□□ 0.76
SSRP1Q08945 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSRP1Q08945 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.82■□□□□ 0.76
SSRP1Q08945 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.82■□□□□ 0.76
SSRP1Q08945 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
SSRP1Q08945 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSRP1Q08945 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSRP1Q08945 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms