Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CACNA1BQ00975 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.67■□□□□ 0.1
CACNA1BQ00975 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CACNA1BQ00975 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CACNA1BQ00975 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CACNA1BQ00975 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CACNA1BQ00975 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.67■□□□□ 0.1
CACNA1BQ00975 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CACNA1BQ00975 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CACNA1BQ00975 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CACNA1BQ00975 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CACNA1BQ00975 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CACNA1BQ00975 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 SLC25A6P2-201ENST00000497974 877 ntBASIC15.66■□□□□ 0.1
CACNA1BQ00975 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 DOC2GP-202ENST00000514950 1163 ntBASIC15.66■□□□□ 0.1
CACNA1BQ00975 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CACNA1BQ00975 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CACNA1BQ00975 RN7SL560P-201ENST00000577943 264 ntBASIC15.66■□□□□ 0.1
CACNA1BQ00975 STK25P1-201ENST00000585406 838 ntBASIC15.66■□□□□ 0.1
CACNA1BQ00975 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CACNA1BQ00975 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CACNA1BQ00975 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CACNA1BQ00975 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CACNA1BQ00975 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CACNA1BQ00975 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 AC104784.1-201ENST00000473096 294 ntBASIC15.66■□□□□ 0.1
CACNA1BQ00975 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CACNA1BQ00975 CHMP4BP1-201ENST00000556017 588 ntBASIC15.66■□□□□ 0.1
CACNA1BQ00975 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CACNA1BQ00975 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CACNA1BQ00975 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CACNA1BQ00975 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CACNA1BQ00975 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CACNA1BQ00975 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CACNA1BQ00975 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CACNA1BQ00975 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 AL080243.2-201ENST00000418783 582 ntBASIC15.65■□□□□ 0.1
CACNA1BQ00975 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CACNA1BQ00975 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CACNA1BQ00975 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CACNA1BQ00975 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CACNA1BQ00975 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CACNA1BQ00975 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CACNA1BQ00975 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CACNA1BQ00975 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 AC008267.1-201ENST00000474858 1069 ntBASIC15.65■□□□□ 0.1
CACNA1BQ00975 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.65■□□□□ 0.1
CACNA1BQ00975 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.64■□□□□ 0.09
CACNA1BQ00975 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.64■□□□□ 0.09
CACNA1BQ00975 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CACNA1BQ00975 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CACNA1BQ00975 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CACNA1BQ00975 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.64■□□□□ 0.09
CACNA1BQ00975 MAGEA5-201ENST00000446757 942 ntBASIC15.64■□□□□ 0.09
CACNA1BQ00975 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.64■□□□□ 0.09
CACNA1BQ00975 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.64■□□□□ 0.09
CACNA1BQ00975 AC233724.13-201ENST00000598383 410 ntBASIC15.64■□□□□ 0.09
CACNA1BQ00975 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.64■□□□□ 0.09
CACNA1BQ00975 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CACNA1BQ00975 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.64■□□□□ 0.09
CACNA1BQ00975 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.64■□□□□ 0.09
CACNA1BQ00975 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CACNA1BQ00975 AC138028.6-201ENST00000616106 1482 ntBASIC15.64■□□□□ 0.09
CACNA1BQ00975 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CACNA1BQ00975 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.64■□□□□ 0.09
CACNA1BQ00975 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms