Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
GABREP78334 AL390754.1-201ENST00000619088 582 ntBASIC16.23■□□□□ 0.19
GABREP78334 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
GABREP78334 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
GABREP78334 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
GABREP78334 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.23■□□□□ 0.19
GABREP78334 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.23■□□□□ 0.19
GABREP78334 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
GABREP78334 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.23■□□□□ 0.19
GABREP78334 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GABREP78334 FO538757.1-201ENST00000623083 1397 ntBASIC16.23■□□□□ 0.19
GABREP78334 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GABREP78334 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GABREP78334 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GABREP78334 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.23■□□□□ 0.19
GABREP78334 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.23■□□□□ 0.19
GABREP78334 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
GABREP78334 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GABREP78334 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
GABREP78334 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GABREP78334 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.23■□□□□ 0.19
GABREP78334 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
GABREP78334 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.22■□□□□ 0.19
GABREP78334 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
GABREP78334 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
GABREP78334 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
GABREP78334 NOC2LP1-202ENST00000452600 2235 ntBASIC16.22■□□□□ 0.19
GABREP78334 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GABREP78334 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABREP78334 AC018470.1-201ENST00000624790 3129 ntBASIC16.22■□□□□ 0.19
GABREP78334 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABREP78334 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.22■□□□□ 0.19
GABREP78334 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABREP78334 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABREP78334 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABREP78334 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GABREP78334 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABREP78334 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABREP78334 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABREP78334 GK-202ENST00000378941 458 ntTSL 3 BASIC16.22■□□□□ 0.19
GABREP78334 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.22■□□□□ 0.19
GABREP78334 TREML5P-201ENST00000421694 576 ntBASIC16.22■□□□□ 0.19
GABREP78334 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.22■□□□□ 0.19
GABREP78334 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
GABREP78334 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.22■□□□□ 0.19
GABREP78334 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.22■□□□□ 0.19
GABREP78334 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.22■□□□□ 0.19
GABREP78334 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.22■□□□□ 0.19
GABREP78334 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GABREP78334 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.22■□□□□ 0.19
GABREP78334 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABREP78334 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.22■□□□□ 0.19
GABREP78334 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABREP78334 AL161645.1-201ENST00000622716 1255 ntBASIC16.22■□□□□ 0.19
GABREP78334 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABREP78334 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.22■□□□□ 0.19
GABREP78334 AP000997.3-201ENST00000623333 2250 ntBASIC16.22■□□□□ 0.19
GABREP78334 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABREP78334 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABREP78334 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
GABREP78334 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABREP78334 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
GABREP78334 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.22■□□□□ 0.19
GABREP78334 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
GABREP78334 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.22■□□□□ 0.19
GABREP78334 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
GABREP78334 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GABREP78334 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GABREP78334 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GABREP78334 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
GABREP78334 UXT-AS1-201ENST00000590504 1525 ntBASIC16.21■□□□□ 0.19
GABREP78334 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GABREP78334 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.21■□□□□ 0.19
GABREP78334 MIR661-201ENST00000384842 89 ntBASIC16.21■□□□□ 0.19
GABREP78334 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.21■□□□□ 0.19
GABREP78334 GPS2P2-201ENST00000430745 888 ntBASIC16.21■□□□□ 0.19
GABREP78334 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.21■□□□□ 0.19
GABREP78334 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
GABREP78334 UGT1A2P-201ENST00000454886 866 ntBASIC16.21■□□□□ 0.19
GABREP78334 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.21■□□□□ 0.19
GABREP78334 AC107918.2-201ENST00000530817 355 ntBASIC16.21■□□□□ 0.19
GABREP78334 SLC25A39P2-201ENST00000537614 270 ntBASIC16.21■□□□□ 0.19
GABREP78334 AC140878.1-201ENST00000565277 250 ntBASIC16.21■□□□□ 0.19
GABREP78334 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GABREP78334 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GABREP78334 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.21■□□□□ 0.19
GABREP78334 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
GABREP78334 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GABREP78334 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GABREP78334 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
GABREP78334 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GABREP78334 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
GABREP78334 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
GABREP78334 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
GABREP78334 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.2■□□□□ 0.18
GABREP78334 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms