Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
RAB5BP61020 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB5BP61020 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB5BP61020 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB5BP61020 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
RAB5BP61020 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RAB5BP61020 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB5BP61020 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB5BP61020 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RAB5BP61020 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB5BP61020 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB5BP61020 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.4□□□□□ -0.26
RAB5BP61020 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
RAB5BP61020 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB5BP61020 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.4□□□□□ -0.26
RAB5BP61020 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RAB5BP61020 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.4□□□□□ -0.26
RAB5BP61020 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB5BP61020 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
RAB5BP61020 CICP20-201ENST00000443330 2801 ntBASIC13.4□□□□□ -0.26
RAB5BP61020 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB5BP61020 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RAB5BP61020 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB5BP61020 PPT1-215ENST00000641471 2368 ntBASIC13.4□□□□□ -0.26
RAB5BP61020 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB5BP61020 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.4□□□□□ -0.26
RAB5BP61020 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB5BP61020 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RAB5BP61020 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RAB5BP61020 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB5BP61020 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB5BP61020 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB5BP61020 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
RAB5BP61020 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB5BP61020 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB5BP61020 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB5BP61020 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB5BP61020 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB5BP61020 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
RAB5BP61020 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.39□□□□□ -0.27
RAB5BP61020 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB5BP61020 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB5BP61020 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB5BP61020 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
RAB5BP61020 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 AC046185.3-201ENST00000623228 1824 ntBASIC13.39□□□□□ -0.27
RAB5BP61020 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
RAB5BP61020 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
RAB5BP61020 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB5BP61020 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB5BP61020 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB5BP61020 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC13.39□□□□□ -0.27
RAB5BP61020 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB5BP61020 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB5BP61020 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.39□□□□□ -0.27
RAB5BP61020 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB5BP61020 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB5BP61020 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB5BP61020 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 CICP24-201ENST00000605464 2705 ntBASIC13.39□□□□□ -0.27
RAB5BP61020 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB5BP61020 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB5BP61020 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB5BP61020 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB5BP61020 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB5BP61020 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RAB5BP61020 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RAB5BP61020 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB5BP61020 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.38□□□□□ -0.27
RAB5BP61020 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms