Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PER3P56645 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
PER3P56645 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
PER3P56645 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PER3P56645 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PER3P56645 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PER3P56645 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PER3P56645 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PER3P56645 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.9■□□□□ 0.14
PER3P56645 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PER3P56645 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PER3P56645 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PER3P56645 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PER3P56645 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
PER3P56645 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.89■□□□□ 0.13
PER3P56645 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PER3P56645 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.89■□□□□ 0.13
PER3P56645 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.89■□□□□ 0.13
PER3P56645 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PER3P56645 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PER3P56645 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.89■□□□□ 0.13
PER3P56645 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.89■□□□□ 0.13
PER3P56645 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.89■□□□□ 0.13
PER3P56645 HTR5BP-201ENST00000430851 1154 ntBASIC15.89■□□□□ 0.13
PER3P56645 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.89■□□□□ 0.13
PER3P56645 AC009947.1-201ENST00000444350 727 ntBASIC15.89■□□□□ 0.13
PER3P56645 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.89■□□□□ 0.13
PER3P56645 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.89■□□□□ 0.13
PER3P56645 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.89■□□□□ 0.13
PER3P56645 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.89■□□□□ 0.13
PER3P56645 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
PER3P56645 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.89■□□□□ 0.13
PER3P56645 AC064836.3-201ENST00000607928 673 ntBASIC15.89■□□□□ 0.13
PER3P56645 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PER3P56645 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PER3P56645 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PER3P56645 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.89■□□□□ 0.13
PER3P56645 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PER3P56645 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.89■□□□□ 0.13
PER3P56645 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PER3P56645 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PER3P56645 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.89■□□□□ 0.13
PER3P56645 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PER3P56645 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PER3P56645 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PER3P56645 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.89■□□□□ 0.13
PER3P56645 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PER3P56645 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PER3P56645 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PER3P56645 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PER3P56645 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
PER3P56645 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.88■□□□□ 0.13
PER3P56645 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.88■□□□□ 0.13
PER3P56645 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PER3P56645 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PER3P56645 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PER3P56645 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PER3P56645 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.88■□□□□ 0.13
PER3P56645 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PER3P56645 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.88■□□□□ 0.13
PER3P56645 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
PER3P56645 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.88■□□□□ 0.13
PER3P56645 AL022326.1-202ENST00000641533 845 ntBASIC15.88■□□□□ 0.13
PER3P56645 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PER3P56645 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PER3P56645 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.88■□□□□ 0.13
PER3P56645 AC132938.6-201ENST00000623828 1655 ntBASIC15.88■□□□□ 0.13
PER3P56645 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PER3P56645 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PER3P56645 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.88■□□□□ 0.13
PER3P56645 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.88■□□□□ 0.13
PER3P56645 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.88■□□□□ 0.13
PER3P56645 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.88■□□□□ 0.13
PER3P56645 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PER3P56645 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PER3P56645 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PER3P56645 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.88■□□□□ 0.13
PER3P56645 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PER3P56645 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PER3P56645 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PER3P56645 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PER3P56645 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PER3P56645 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PER3P56645 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.87■□□□□ 0.13
PER3P56645 AC002310.6-201ENST00000624451 1377 ntBASIC15.87■□□□□ 0.13
PER3P56645 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.87■□□□□ 0.13
PER3P56645 PHGDH-209ENST00000641074 1780 ntBASIC15.87■□□□□ 0.13
PER3P56645 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PER3P56645 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PER3P56645 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PER3P56645 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PER3P56645 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PER3P56645 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PER3P56645 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PER3P56645 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PER3P56645 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.87■□□□□ 0.13
PER3P56645 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.87■□□□□ 0.13
PER3P56645 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.87■□□□□ 0.13
PER3P56645 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PER3P56645 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms