Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.82■□□□□ 0.6
PMS1P54277 AL353135.1-201ENST00000606729 504 ntBASIC18.82■□□□□ 0.6
PMS1P54277 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.82■□□□□ 0.6
PMS1P54277 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PMS1P54277 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PMS1P54277 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PMS1P54277 BCL2-203ENST00000589955 5011 ntBASIC18.82■□□□□ 0.6
PMS1P54277 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PMS1P54277 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.82■□□□□ 0.6
PMS1P54277 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PMS1P54277 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PMS1P54277 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PMS1P54277 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PMS1P54277 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PMS1P54277 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PMS1P54277 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PMS1P54277 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.81■□□□□ 0.6
PMS1P54277 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PMS1P54277 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PMS1P54277 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.81■□□□□ 0.6
PMS1P54277 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PMS1P54277 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PMS1P54277 PRYP5-201ENST00000451909 266 ntBASIC18.81■□□□□ 0.6
PMS1P54277 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
PMS1P54277 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.81■□□□□ 0.6
PMS1P54277 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PMS1P54277 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PMS1P54277 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PMS1P54277 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.81■□□□□ 0.6
PMS1P54277 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PMS1P54277 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PMS1P54277 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PMS1P54277 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.81■□□□□ 0.6
PMS1P54277 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.81■□□□□ 0.6
PMS1P54277 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.81■□□□□ 0.6
PMS1P54277 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PMS1P54277 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PMS1P54277 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.81■□□□□ 0.6
PMS1P54277 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PMS1P54277 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMS1P54277 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PMS1P54277 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
PMS1P54277 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.8■□□□□ 0.6
PMS1P54277 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.8■□□□□ 0.6
PMS1P54277 HLA-A-202ENST00000376806 1854 ntBASIC18.8■□□□□ 0.6
PMS1P54277 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PMS1P54277 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMS1P54277 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PMS1P54277 KRT18P31-201ENST00000506277 1292 ntBASIC18.8■□□□□ 0.6
PMS1P54277 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.8■□□□□ 0.6
PMS1P54277 MIR3652-201ENST00000579335 131 ntBASIC18.8■□□□□ 0.6
PMS1P54277 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.8■□□□□ 0.6
PMS1P54277 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PMS1P54277 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.8■□□□□ 0.6
PMS1P54277 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMS1P54277 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PMS1P54277 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PMS1P54277 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PMS1P54277 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
PMS1P54277 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMS1P54277 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.8■□□□□ 0.6
PMS1P54277 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMS1P54277 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMS1P54277 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.8■□□□□ 0.6
PMS1P54277 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMS1P54277 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PMS1P54277 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PMS1P54277 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
PMS1P54277 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PMS1P54277 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.79■□□□□ 0.6
PMS1P54277 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PMS1P54277 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.79■□□□□ 0.6
PMS1P54277 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PMS1P54277 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PMS1P54277 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PMS1P54277 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PMS1P54277 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PMS1P54277 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.79■□□□□ 0.6
PMS1P54277 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PMS1P54277 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.79■□□□□ 0.6
PMS1P54277 TSPY19P-201ENST00000418461 509 ntBASIC18.79■□□□□ 0.6
PMS1P54277 TSPY18P-201ENST00000441642 509 ntBASIC18.79■□□□□ 0.6
PMS1P54277 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.79■□□□□ 0.6
PMS1P54277 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.79■□□□□ 0.6
PMS1P54277 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PMS1P54277 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PMS1P54277 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PMS1P54277 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.79■□□□□ 0.6
PMS1P54277 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.79■□□□□ 0.6
PMS1P54277 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PMS1P54277 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PMS1P54277 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PMS1P54277 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PMS1P54277 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.79■□□□□ 0.6
PMS1P54277 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PMS1P54277 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PMS1P54277 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PMS1P54277 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PMS1P54277 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PMS1P54277 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms