Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ATXN3P54252 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ATXN3P54252 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.53■□□□□ 0.4
ATXN3P54252 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.53■□□□□ 0.4
ATXN3P54252 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.53■□□□□ 0.4
ATXN3P54252 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ATXN3P54252 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.53■□□□□ 0.4
ATXN3P54252 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.53■□□□□ 0.4
ATXN3P54252 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.53■□□□□ 0.4
ATXN3P54252 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
ATXN3P54252 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
ATXN3P54252 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.53■□□□□ 0.4
ATXN3P54252 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.53■□□□□ 0.4
ATXN3P54252 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
ATXN3P54252 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ATXN3P54252 AL096828.2-201ENST00000567259 1965 ntBASIC17.53■□□□□ 0.4
ATXN3P54252 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATXN3P54252 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.53■□□□□ 0.4
ATXN3P54252 AC011676.5-201ENST00000624864 2660 ntBASIC17.53■□□□□ 0.4
ATXN3P54252 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.53■□□□□ 0.4
ATXN3P54252 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.53■□□□□ 0.4
ATXN3P54252 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.52■□□□□ 0.4
ATXN3P54252 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATXN3P54252 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATXN3P54252 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATXN3P54252 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATXN3P54252 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATXN3P54252 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATXN3P54252 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATXN3P54252 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATXN3P54252 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATXN3P54252 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATXN3P54252 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATXN3P54252 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.52■□□□□ 0.4
ATXN3P54252 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.52■□□□□ 0.4
ATXN3P54252 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.52■□□□□ 0.4
ATXN3P54252 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.52■□□□□ 0.4
ATXN3P54252 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
ATXN3P54252 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATXN3P54252 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATXN3P54252 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATXN3P54252 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATXN3P54252 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
ATXN3P54252 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATXN3P54252 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.52■□□□□ 0.39
ATXN3P54252 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATXN3P54252 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATXN3P54252 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ATXN3P54252 FLJ13224-201ENST00000313737 1514 ntBASIC17.52■□□□□ 0.39
ATXN3P54252 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATXN3P54252 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
ATXN3P54252 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATXN3P54252 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.51■□□□□ 0.39
ATXN3P54252 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.51■□□□□ 0.39
ATXN3P54252 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.51■□□□□ 0.39
ATXN3P54252 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATXN3P54252 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.51■□□□□ 0.39
ATXN3P54252 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.51■□□□□ 0.39
ATXN3P54252 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATXN3P54252 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATXN3P54252 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATXN3P54252 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.51■□□□□ 0.39
ATXN3P54252 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ATXN3P54252 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATXN3P54252 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.51■□□□□ 0.39
ATXN3P54252 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ATXN3P54252 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.51■□□□□ 0.39
ATXN3P54252 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.51■□□□□ 0.39
ATXN3P54252 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ATXN3P54252 AC136632.2-201ENST00000512891 861 ntBASIC17.51■□□□□ 0.39
ATXN3P54252 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.51■□□□□ 0.39
ATXN3P54252 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.51■□□□□ 0.39
ATXN3P54252 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.51■□□□□ 0.39
ATXN3P54252 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
ATXN3P54252 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATXN3P54252 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATXN3P54252 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATXN3P54252 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 AC079776.2-201ENST00000641154 1609 ntBASIC17.5■□□□□ 0.39
ATXN3P54252 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms