Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
CLTCL1P53675 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC24.17■■□□□ 1.46
CLTCL1P53675 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC24.17■■□□□ 1.46
CLTCL1P53675 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC24.17■■□□□ 1.46
CLTCL1P53675 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLTCL1P53675 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC24.17■■□□□ 1.46
CLTCL1P53675 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC24.17■■□□□ 1.46
CLTCL1P53675 SNX33P1-201ENST00000592116 1762 ntBASIC24.17■■□□□ 1.46
CLTCL1P53675 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC24.17■■□□□ 1.46
CLTCL1P53675 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLTCL1P53675 TDG-209ENST00000544861 1387 ntTSL 2 BASIC24.17■■□□□ 1.46
CLTCL1P53675 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLTCL1P53675 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC24.17■■□□□ 1.46
CLTCL1P53675 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC24.17■■□□□ 1.46
CLTCL1P53675 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC24.17■■□□□ 1.46
CLTCL1P53675 RARRES2P9-201ENST00000565168 469 ntBASIC24.17■■□□□ 1.46
CLTCL1P53675 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLTCL1P53675 NOC2LP2-201ENST00000407594 1944 ntBASIC24.17■■□□□ 1.46
CLTCL1P53675 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLTCL1P53675 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC24.16■■□□□ 1.46
CLTCL1P53675 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CLTCL1P53675 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLTCL1P53675 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
CLTCL1P53675 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC24.16■■□□□ 1.46
CLTCL1P53675 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
CLTCL1P53675 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLTCL1P53675 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC24.16■■□□□ 1.46
CLTCL1P53675 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC24.16■■□□□ 1.46
CLTCL1P53675 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC24.16■■□□□ 1.46
CLTCL1P53675 AC239800.4-201ENST00000603712 296 ntBASIC24.16■■□□□ 1.46
CLTCL1P53675 AP001350.2-201ENST00000625104 1094 ntBASIC24.16■■□□□ 1.46
CLTCL1P53675 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
CLTCL1P53675 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC24.16■■□□□ 1.46
CLTCL1P53675 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLTCL1P53675 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CLTCL1P53675 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC24.16■■□□□ 1.46
CLTCL1P53675 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLTCL1P53675 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
CLTCL1P53675 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLTCL1P53675 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC24.15■■□□□ 1.46
CLTCL1P53675 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLTCL1P53675 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLTCL1P53675 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC24.15■■□□□ 1.46
CLTCL1P53675 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLTCL1P53675 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CLTCL1P53675 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLTCL1P53675 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLTCL1P53675 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC24.15■■□□□ 1.46
CLTCL1P53675 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC24.14■■□□□ 1.46
CLTCL1P53675 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
CLTCL1P53675 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CLTCL1P53675 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CLTCL1P53675 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CLTCL1P53675 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CLTCL1P53675 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
CLTCL1P53675 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC24.14■■□□□ 1.46
CLTCL1P53675 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC24.14■■□□□ 1.46
CLTCL1P53675 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
CLTCL1P53675 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CLTCL1P53675 AC073592.8-201ENST00000624126 511 ntBASIC24.14■■□□□ 1.46
CLTCL1P53675 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC24.14■■□□□ 1.46
CLTCL1P53675 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.46
CLTCL1P53675 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
CLTCL1P53675 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC24.14■■□□□ 1.45
CLTCL1P53675 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CLTCL1P53675 AP3S2-216ENST00000617003 1561 ntBASIC24.14■■□□□ 1.45
CLTCL1P53675 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CLTCL1P53675 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CLTCL1P53675 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
CLTCL1P53675 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CLTCL1P53675 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLTCL1P53675 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC24.13■■□□□ 1.45
CLTCL1P53675 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLTCL1P53675 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CLTCL1P53675 RBM7-207ENST00000544582 692 ntTSL 3 BASIC24.13■■□□□ 1.45
CLTCL1P53675 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLTCL1P53675 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLTCL1P53675 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CLTCL1P53675 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC24.13■■□□□ 1.45
CLTCL1P53675 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CLTCL1P53675 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC24.13■■□□□ 1.45
CLTCL1P53675 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLTCL1P53675 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLTCL1P53675 FAM220BP-201ENST00000377689 816 ntBASIC24.13■■□□□ 1.45
CLTCL1P53675 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CLTCL1P53675 AC015922.1-201ENST00000421102 1152 ntBASIC24.13■■□□□ 1.45
CLTCL1P53675 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLTCL1P53675 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC24.13■■□□□ 1.45
CLTCL1P53675 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC24.13■■□□□ 1.45
CLTCL1P53675 LINC02560-201ENST00000596379 459 ntBASIC24.13■■□□□ 1.45
CLTCL1P53675 AC012645.4-201ENST00000610691 1061 ntBASIC24.13■■□□□ 1.45
CLTCL1P53675 AF228730.6-201ENST00000641497 218 ntBASIC24.13■■□□□ 1.45
CLTCL1P53675 AC084121.3-201ENST00000641716 218 ntBASIC24.13■■□□□ 1.45
CLTCL1P53675 AC105233.6-201ENST00000642093 218 ntBASIC24.13■■□□□ 1.45
CLTCL1P53675 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLTCL1P53675 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC24.13■■□□□ 1.45
CLTCL1P53675 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLTCL1P53675 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLTCL1P53675 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLTCL1P53675 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms