Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF140P52738 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF140P52738 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF140P52738 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF140P52738 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ZNF140P52738 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF140P52738 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
ZNF140P52738 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF140P52738 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.99■□□□□ 0.31
ZNF140P52738 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF140P52738 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF140P52738 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.99■□□□□ 0.31
ZNF140P52738 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.99■□□□□ 0.31
ZNF140P52738 IGHV3-65-201ENST00000523210 341 ntBASIC16.99■□□□□ 0.31
ZNF140P52738 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.99■□□□□ 0.31
ZNF140P52738 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.99■□□□□ 0.31
ZNF140P52738 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.99■□□□□ 0.31
ZNF140P52738 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ZNF140P52738 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.99■□□□□ 0.31
ZNF140P52738 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF140P52738 AC117500.6-201ENST00000624871 588 ntBASIC16.99■□□□□ 0.31
ZNF140P52738 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ZNF140P52738 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.99■□□□□ 0.31
ZNF140P52738 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF140P52738 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF140P52738 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF140P52738 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF140P52738 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF140P52738 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF140P52738 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ZNF140P52738 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.99■□□□□ 0.31
ZNF140P52738 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF140P52738 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF140P52738 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ZNF140P52738 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.98■□□□□ 0.31
ZNF140P52738 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.98■□□□□ 0.31
ZNF140P52738 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
ZNF140P52738 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.98■□□□□ 0.31
ZNF140P52738 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ZNF140P52738 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
ZNF140P52738 AL662844.1-201ENST00000546340 181 ntBASIC16.98■□□□□ 0.31
ZNF140P52738 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.98■□□□□ 0.31
ZNF140P52738 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.98■□□□□ 0.31
ZNF140P52738 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.98■□□□□ 0.31
ZNF140P52738 REXO1L3P-201ENST00000622202 1288 ntBASIC16.98■□□□□ 0.31
ZNF140P52738 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.98■□□□□ 0.31
ZNF140P52738 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ZNF140P52738 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ZNF140P52738 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ZNF140P52738 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
ZNF140P52738 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF140P52738 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF140P52738 AL645728.1-201ENST00000366221 2101 ntBASIC16.97■□□□□ 0.31
ZNF140P52738 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF140P52738 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF140P52738 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF140P52738 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ZNF140P52738 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF140P52738 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF140P52738 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.97■□□□□ 0.31
ZNF140P52738 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.97■□□□□ 0.31
ZNF140P52738 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF140P52738 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.97■□□□□ 0.31
ZNF140P52738 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF140P52738 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF140P52738 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.97■□□□□ 0.31
ZNF140P52738 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF140P52738 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF140P52738 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.97■□□□□ 0.31
ZNF140P52738 AL121894.2-201ENST00000602977 491 ntBASIC16.97■□□□□ 0.31
ZNF140P52738 GGTLC5P-201ENST00000617623 998 ntBASIC16.97■□□□□ 0.31
ZNF140P52738 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.97■□□□□ 0.31
ZNF140P52738 AC005593.1-201ENST00000624894 515 ntBASIC16.97■□□□□ 0.31
ZNF140P52738 PGM5P2-202ENST00000637225 1043 ntBASIC16.97■□□□□ 0.31
ZNF140P52738 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.97■□□□□ 0.31
ZNF140P52738 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF140P52738 FLJ38576-201ENST00000623820 2459 ntBASIC16.97■□□□□ 0.31
ZNF140P52738 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms