Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CHRNA4P43681 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.26■□□□□ 0.35
CHRNA4P43681 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA4P43681 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA4P43681 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.26■□□□□ 0.35
CHRNA4P43681 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA4P43681 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA4P43681 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA4P43681 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA4P43681 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA4P43681 AC243591.1-201ENST00000452967 1364 ntBASIC17.26■□□□□ 0.35
CHRNA4P43681 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CHRNA4P43681 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRNA4P43681 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.25■□□□□ 0.35
CHRNA4P43681 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA4P43681 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.25■□□□□ 0.35
CHRNA4P43681 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA4P43681 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CHRNA4P43681 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CHRNA4P43681 AC084018.2-201ENST00000613093 2607 ntBASIC17.25■□□□□ 0.35
CHRNA4P43681 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CHRNA4P43681 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA4P43681 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
CHRNA4P43681 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.25■□□□□ 0.35
CHRNA4P43681 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA4P43681 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA4P43681 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.25■□□□□ 0.35
CHRNA4P43681 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.25■□□□□ 0.35
CHRNA4P43681 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRNA4P43681 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.25■□□□□ 0.35
CHRNA4P43681 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA4P43681 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.25■□□□□ 0.35
CHRNA4P43681 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRNA4P43681 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.25■□□□□ 0.35
CHRNA4P43681 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.25■□□□□ 0.35
CHRNA4P43681 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRNA4P43681 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.25■□□□□ 0.35
CHRNA4P43681 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.25■□□□□ 0.35
CHRNA4P43681 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.25■□□□□ 0.35
CHRNA4P43681 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CHRNA4P43681 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA4P43681 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA4P43681 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA4P43681 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CHRNA4P43681 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA4P43681 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA4P43681 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA4P43681 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA4P43681 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA4P43681 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA4P43681 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRNA4P43681 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA4P43681 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 PCDHB17P-201ENST00000539533 2393 ntBASIC17.24■□□□□ 0.35
CHRNA4P43681 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 FLJ38576-201ENST00000623820 2459 ntBASIC17.24■□□□□ 0.35
CHRNA4P43681 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CHRNA4P43681 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 AP002414.1-201ENST00000391405 1147 ntBASIC17.24■□□□□ 0.35
CHRNA4P43681 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA4P43681 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 PTCHD3P3-201ENST00000403073 906 ntBASIC17.24■□□□□ 0.35
CHRNA4P43681 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CHRNA4P43681 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.24■□□□□ 0.35
CHRNA4P43681 LAGE3P1-201ENST00000425356 484 ntBASIC17.24■□□□□ 0.35
CHRNA4P43681 KRT18P67-201ENST00000432816 1264 ntBASIC17.24■□□□□ 0.35
CHRNA4P43681 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.24■□□□□ 0.35
CHRNA4P43681 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.24■□□□□ 0.35
CHRNA4P43681 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.24■□□□□ 0.35
CHRNA4P43681 OR7E14P-202ENST00000530490 1290 ntBASIC17.24■□□□□ 0.35
CHRNA4P43681 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA4P43681 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA4P43681 DUX4L17-201ENST00000557360 1267 ntBASIC17.24■□□□□ 0.35
CHRNA4P43681 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.24■□□□□ 0.35
CHRNA4P43681 AC012640.2-201ENST00000561606 901 ntBASIC17.24■□□□□ 0.35
CHRNA4P43681 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.24■□□□□ 0.35
CHRNA4P43681 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA4P43681 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA4P43681 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CHRNA4P43681 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.24■□□□□ 0.35
CHRNA4P43681 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA4P43681 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CHRNA4P43681 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CHRNA4P43681 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA4P43681 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms