Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HADHAP40939 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.34■□□□□ 0.37
HADHAP40939 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.34■□□□□ 0.37
HADHAP40939 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.34■□□□□ 0.37
HADHAP40939 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HADHAP40939 AL139288.1-201ENST00000623748 933 ntBASIC17.34■□□□□ 0.37
HADHAP40939 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.34■□□□□ 0.37
HADHAP40939 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HADHAP40939 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HADHAP40939 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HADHAP40939 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.34■□□□□ 0.37
HADHAP40939 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
HADHAP40939 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HADHAP40939 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HADHAP40939 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
HADHAP40939 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.33■□□□□ 0.37
HADHAP40939 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HADHAP40939 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
HADHAP40939 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HADHAP40939 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HADHAP40939 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HADHAP40939 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HADHAP40939 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
HADHAP40939 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HADHAP40939 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HADHAP40939 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HADHAP40939 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HADHAP40939 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HADHAP40939 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HADHAP40939 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HADHAP40939 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HADHAP40939 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HADHAP40939 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HADHAP40939 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.33■□□□□ 0.36
HADHAP40939 PRYP5-201ENST00000451909 266 ntBASIC17.33■□□□□ 0.36
HADHAP40939 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.33■□□□□ 0.36
HADHAP40939 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.33■□□□□ 0.36
HADHAP40939 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HADHAP40939 REXO1L6P-202ENST00000619970 1078 ntBASIC17.33■□□□□ 0.36
HADHAP40939 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HADHAP40939 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HADHAP40939 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HADHAP40939 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HADHAP40939 AC105020.1-201ENST00000435356 2205 ntBASIC17.33■□□□□ 0.36
HADHAP40939 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
HADHAP40939 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HADHAP40939 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.33■□□□□ 0.36
HADHAP40939 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.33■□□□□ 0.36
HADHAP40939 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.33■□□□□ 0.36
HADHAP40939 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HADHAP40939 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
HADHAP40939 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HADHAP40939 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HADHAP40939 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HADHAP40939 AC148477.5-201ENST00000625164 1645 ntBASIC17.32■□□□□ 0.36
HADHAP40939 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.32■□□□□ 0.36
HADHAP40939 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HADHAP40939 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
HADHAP40939 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HADHAP40939 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HADHAP40939 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HADHAP40939 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HADHAP40939 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
HADHAP40939 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HADHAP40939 AGGF1P2-201ENST00000426656 2106 ntBASIC17.32■□□□□ 0.36
HADHAP40939 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HADHAP40939 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HADHAP40939 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HADHAP40939 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HADHAP40939 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HADHAP40939 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.32■□□□□ 0.36
HADHAP40939 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.32■□□□□ 0.36
HADHAP40939 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.32■□□□□ 0.36
HADHAP40939 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.32■□□□□ 0.36
HADHAP40939 MTDHP3-201ENST00000594186 672 ntBASIC17.32■□□□□ 0.36
HADHAP40939 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.32■□□□□ 0.36
HADHAP40939 AL355877.3-201ENST00000622820 899 ntBASIC17.32■□□□□ 0.36
HADHAP40939 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HADHAP40939 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
HADHAP40939 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HADHAP40939 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.32■□□□□ 0.36
HADHAP40939 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HADHAP40939 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HADHAP40939 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HADHAP40939 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
HADHAP40939 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HADHAP40939 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HADHAP40939 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
HADHAP40939 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HADHAP40939 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HADHAP40939 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HADHAP40939 AL356309.3-201ENST00000624132 1934 ntBASIC17.31■□□□□ 0.36
HADHAP40939 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
HADHAP40939 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HADHAP40939 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HADHAP40939 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HADHAP40939 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HADHAP40939 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
HADHAP40939 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
HADHAP40939 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms