Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RFC5P40937 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC5P40937 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC5P40937 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC5P40937 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFC5P40937 AC074386.1-202ENST00000463561 864 ntBASIC18.82■□□□□ 0.6
RFC5P40937 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RFC5P40937 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.82■□□□□ 0.6
RFC5P40937 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RFC5P40937 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.82■□□□□ 0.6
RFC5P40937 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RFC5P40937 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.82■□□□□ 0.6
RFC5P40937 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.82■□□□□ 0.6
RFC5P40937 AL645728.2-201ENST00000641974 660 ntBASIC18.82■□□□□ 0.6
RFC5P40937 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.82■□□□□ 0.6
RFC5P40937 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.82■□□□□ 0.6
RFC5P40937 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC5P40937 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC5P40937 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFC5P40937 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.82■□□□□ 0.6
RFC5P40937 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC5P40937 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFC5P40937 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC5P40937 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
RFC5P40937 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFC5P40937 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC5P40937 TOP3BP1-201ENST00000420768 1380 ntBASIC18.81■□□□□ 0.6
RFC5P40937 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFC5P40937 AL021920.2-201ENST00000624828 1351 ntBASIC18.81■□□□□ 0.6
RFC5P40937 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC5P40937 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC5P40937 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.81■□□□□ 0.6
RFC5P40937 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC5P40937 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RFC5P40937 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFC5P40937 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.81■□□□□ 0.6
RFC5P40937 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC5P40937 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
RFC5P40937 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFC5P40937 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFC5P40937 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC5P40937 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.81■□□□□ 0.6
RFC5P40937 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.81■□□□□ 0.6
RFC5P40937 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RFC5P40937 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.81■□□□□ 0.6
RFC5P40937 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.81■□□□□ 0.6
RFC5P40937 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RFC5P40937 AC112482.1-201ENST00000492080 688 ntBASIC18.81■□□□□ 0.6
RFC5P40937 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.81■□□□□ 0.6
RFC5P40937 AC139530.3-201ENST00000620344 690 ntBASIC18.81■□□□□ 0.6
RFC5P40937 C20orf181-201ENST00000623918 480 ntBASIC18.81■□□□□ 0.6
RFC5P40937 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC5P40937 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC5P40937 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RFC5P40937 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RFC5P40937 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC5P40937 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC5P40937 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC5P40937 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.81■□□□□ 0.6
RFC5P40937 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC5P40937 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC5P40937 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.8■□□□□ 0.6
RFC5P40937 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.8■□□□□ 0.6
RFC5P40937 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RFC5P40937 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC5P40937 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.8■□□□□ 0.6
RFC5P40937 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC5P40937 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RFC5P40937 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.8■□□□□ 0.6
RFC5P40937 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC5P40937 AC141586.5-201ENST00000624546 2050 ntBASIC18.8■□□□□ 0.6
RFC5P40937 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RFC5P40937 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RFC5P40937 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC5P40937 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC5P40937 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.8■□□□□ 0.6
RFC5P40937 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC5P40937 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RFC5P40937 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC5P40937 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.8■□□□□ 0.6
RFC5P40937 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.8■□□□□ 0.6
RFC5P40937 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
RFC5P40937 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.8■□□□□ 0.6
RFC5P40937 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFC5P40937 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RFC5P40937 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC5P40937 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC5P40937 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RFC5P40937 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.8■□□□□ 0.6
RFC5P40937 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFC5P40937 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.8■□□□□ 0.6
RFC5P40937 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RFC5P40937 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RFC5P40937 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC5P40937 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC5P40937 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFC5P40937 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFC5P40937 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RFC5P40937 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFC5P40937 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms