Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCLP35914 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17■□□□□ 0.31
HMGCLP35914 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCLP35914 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17■□□□□ 0.31
HMGCLP35914 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCLP35914 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCLP35914 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCLP35914 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCLP35914 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HMGCLP35914 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCLP35914 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17■□□□□ 0.31
HMGCLP35914 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17■□□□□ 0.31
HMGCLP35914 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
HMGCLP35914 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17■□□□□ 0.31
HMGCLP35914 AC108073.2-201ENST00000464002 357 ntBASIC17■□□□□ 0.31
HMGCLP35914 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17■□□□□ 0.31
HMGCLP35914 SLC25A6P2-201ENST00000497974 877 ntBASIC17■□□□□ 0.31
HMGCLP35914 AC079776.4-201ENST00000511039 504 ntBASIC17■□□□□ 0.31
HMGCLP35914 RNA5SP415-201ENST00000517246 115 ntBASIC17■□□□□ 0.31
HMGCLP35914 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17■□□□□ 0.31
HMGCLP35914 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMGCLP35914 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCLP35914 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HMGCLP35914 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMGCLP35914 BX640515.1-201ENST00000617215 977 ntBASIC17■□□□□ 0.31
HMGCLP35914 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17■□□□□ 0.31
HMGCLP35914 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17■□□□□ 0.31
HMGCLP35914 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HMGCLP35914 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCLP35914 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
HMGCLP35914 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMGCLP35914 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HMGCLP35914 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMGCLP35914 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
HMGCLP35914 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HMGCLP35914 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17■□□□□ 0.31
HMGCLP35914 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCLP35914 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMGCLP35914 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCLP35914 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCLP35914 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.99■□□□□ 0.31
HMGCLP35914 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCLP35914 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.99■□□□□ 0.31
HMGCLP35914 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCLP35914 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGCLP35914 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCLP35914 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.99■□□□□ 0.31
HMGCLP35914 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
HMGCLP35914 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGCLP35914 KRT8P49-201ENST00000604166 1432 ntBASIC16.99■□□□□ 0.31
HMGCLP35914 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCLP35914 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCLP35914 AC105020.1-201ENST00000435356 2205 ntBASIC16.99■□□□□ 0.31
HMGCLP35914 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HMGCLP35914 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCLP35914 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGCLP35914 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGCLP35914 MRPL20P1-201ENST00000400819 433 ntBASIC16.99■□□□□ 0.31
HMGCLP35914 PRSS29P-201ENST00000440800 595 ntBASIC16.99■□□□□ 0.31
HMGCLP35914 AC009947.1-201ENST00000444350 727 ntBASIC16.99■□□□□ 0.31
HMGCLP35914 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.99■□□□□ 0.31
HMGCLP35914 AC108751.1-201ENST00000490852 363 ntBASIC16.99■□□□□ 0.31
HMGCLP35914 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCLP35914 AC145285.3-201ENST00000564603 959 ntBASIC16.99■□□□□ 0.31
HMGCLP35914 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.99■□□□□ 0.31
HMGCLP35914 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.99■□□□□ 0.31
HMGCLP35914 REXO1L3P-201ENST00000622202 1288 ntBASIC16.99■□□□□ 0.31
HMGCLP35914 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HMGCLP35914 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCLP35914 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCLP35914 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCLP35914 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGCLP35914 TOP3BP1-201ENST00000420768 1380 ntBASIC16.99■□□□□ 0.31
HMGCLP35914 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCLP35914 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCLP35914 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
HMGCLP35914 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HMGCLP35914 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCLP35914 IL9RP2-201ENST00000423948 1312 ntBASIC16.98■□□□□ 0.31
HMGCLP35914 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HMGCLP35914 AC129492.6-201ENST00000611383 1305 ntBASIC16.98■□□□□ 0.31
HMGCLP35914 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCLP35914 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGCLP35914 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCLP35914 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCLP35914 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGCLP35914 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCLP35914 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCLP35914 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCLP35914 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
HMGCLP35914 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HMGCLP35914 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCLP35914 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCLP35914 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.98■□□□□ 0.31
HMGCLP35914 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
HMGCLP35914 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGCLP35914 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGCLP35914 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms