Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RORAP35398 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RORAP35398 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
RORAP35398 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.26■□□□□ 0.19
RORAP35398 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RORAP35398 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.26■□□□□ 0.19
RORAP35398 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RORAP35398 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RORAP35398 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RORAP35398 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
RORAP35398 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RORAP35398 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RORAP35398 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.25■□□□□ 0.19
RORAP35398 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RORAP35398 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RORAP35398 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RORAP35398 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RORAP35398 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RORAP35398 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RORAP35398 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RORAP35398 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RORAP35398 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RORAP35398 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RORAP35398 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RORAP35398 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RORAP35398 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.25■□□□□ 0.19
RORAP35398 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.25■□□□□ 0.19
RORAP35398 AC005829.1-201ENST00000570002 483 ntBASIC16.25■□□□□ 0.19
RORAP35398 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.25■□□□□ 0.19
RORAP35398 C20orf181-201ENST00000623918 480 ntBASIC16.25■□□□□ 0.19
RORAP35398 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
RORAP35398 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RORAP35398 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RORAP35398 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RORAP35398 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.25■□□□□ 0.19
RORAP35398 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
RORAP35398 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RORAP35398 AL138688.1-201ENST00000624851 1594 ntBASIC16.25■□□□□ 0.19
RORAP35398 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RORAP35398 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.25■□□□□ 0.19
RORAP35398 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RORAP35398 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RORAP35398 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RORAP35398 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.24■□□□□ 0.19
RORAP35398 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.24■□□□□ 0.19
RORAP35398 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RORAP35398 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.24■□□□□ 0.19
RORAP35398 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RORAP35398 LINC00896-202ENST00000609602 2128 ntBASIC16.24■□□□□ 0.19
RORAP35398 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RORAP35398 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.24■□□□□ 0.19
RORAP35398 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.24■□□□□ 0.19
RORAP35398 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RORAP35398 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RORAP35398 AC211486.1-202ENST00000416371 468 ntBASIC16.24■□□□□ 0.19
RORAP35398 AP006288.1-201ENST00000446065 395 ntBASIC16.24■□□□□ 0.19
RORAP35398 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.24■□□□□ 0.19
RORAP35398 AC211476.1-201ENST00000503899 468 ntBASIC16.24■□□□□ 0.19
RORAP35398 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.24■□□□□ 0.19
RORAP35398 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.24■□□□□ 0.19
RORAP35398 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.24■□□□□ 0.19
RORAP35398 KRT19P2-202ENST00000557173 1012 ntBASIC16.24■□□□□ 0.19
RORAP35398 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.24■□□□□ 0.19
RORAP35398 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.24■□□□□ 0.19
RORAP35398 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.24■□□□□ 0.19
RORAP35398 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
RORAP35398 AC079781.4-201ENST00000641908 219 ntBASIC16.24■□□□□ 0.19
RORAP35398 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
RORAP35398 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RORAP35398 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RORAP35398 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RORAP35398 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RORAP35398 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RORAP35398 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.24■□□□□ 0.19
RORAP35398 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RORAP35398 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RORAP35398 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RORAP35398 BCAR1-209ENST00000546196 1340 ntBASIC16.23■□□□□ 0.19
RORAP35398 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RORAP35398 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.23■□□□□ 0.19
RORAP35398 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RORAP35398 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RORAP35398 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RORAP35398 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RORAP35398 RPS8P6-201ENST00000426177 609 ntBASIC16.23■□□□□ 0.19
RORAP35398 MKNK2P1-201ENST00000437526 628 ntBASIC16.23■□□□□ 0.19
RORAP35398 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.23■□□□□ 0.19
RORAP35398 CXCL1P1-201ENST00000502804 216 ntBASIC16.23■□□□□ 0.19
RORAP35398 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RORAP35398 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
RORAP35398 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.23■□□□□ 0.19
RORAP35398 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RORAP35398 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RORAP35398 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RORAP35398 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.23■□□□□ 0.19
RORAP35398 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RORAP35398 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
RORAP35398 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RORAP35398 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.22■□□□□ 0.19
RORAP35398 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms