Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RFC1P35251 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.06■□□□□ 0.48
RFC1P35251 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.06■□□□□ 0.48
RFC1P35251 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.06■□□□□ 0.48
RFC1P35251 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC1P35251 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC1P35251 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.05■□□□□ 0.48
RFC1P35251 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC1P35251 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC1P35251 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
RFC1P35251 AC005915.1-201ENST00000624912 2018 ntBASIC18.05■□□□□ 0.48
RFC1P35251 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFC1P35251 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFC1P35251 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC1P35251 FRMD8P1-201ENST00000440433 1524 ntBASIC18.05■□□□□ 0.48
RFC1P35251 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFC1P35251 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.05■□□□□ 0.48
RFC1P35251 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.05■□□□□ 0.48
RFC1P35251 DUSP5P1-201ENST00000441325 1139 ntBASIC18.05■□□□□ 0.48
RFC1P35251 SAPCD2P3-201ENST00000455031 850 ntBASIC18.05■□□□□ 0.48
RFC1P35251 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.05■□□□□ 0.48
RFC1P35251 AC124947.2-201ENST00000547118 1133 ntBASIC18.05■□□□□ 0.48
RFC1P35251 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.05■□□□□ 0.48
RFC1P35251 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.05■□□□□ 0.48
RFC1P35251 LINC01711-201ENST00000598340 967 ntBASIC18.05■□□□□ 0.48
RFC1P35251 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RFC1P35251 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.05■□□□□ 0.48
RFC1P35251 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFC1P35251 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC1P35251 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC1P35251 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFC1P35251 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC1P35251 AC105020.1-201ENST00000435356 2205 ntBASIC18.04■□□□□ 0.48
RFC1P35251 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFC1P35251 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFC1P35251 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFC1P35251 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RFC1P35251 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFC1P35251 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFC1P35251 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFC1P35251 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFC1P35251 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFC1P35251 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
RFC1P35251 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.04■□□□□ 0.48
RFC1P35251 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.04■□□□□ 0.48
RFC1P35251 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RFC1P35251 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFC1P35251 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFC1P35251 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFC1P35251 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.04■□□□□ 0.48
RFC1P35251 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFC1P35251 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.03■□□□□ 0.48
RFC1P35251 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC1P35251 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
RFC1P35251 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC1P35251 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC1P35251 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RFC1P35251 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.03■□□□□ 0.48
RFC1P35251 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFC1P35251 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RFC1P35251 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFC1P35251 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC1P35251 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
RFC1P35251 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC1P35251 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
RFC1P35251 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFC1P35251 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.03■□□□□ 0.48
RFC1P35251 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RFC1P35251 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.03■□□□□ 0.48
RFC1P35251 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.03■□□□□ 0.48
RFC1P35251 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.03■□□□□ 0.48
RFC1P35251 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RFC1P35251 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC1P35251 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC1P35251 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.03■□□□□ 0.48
RFC1P35251 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RFC1P35251 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC1P35251 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RFC1P35251 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.03■□□□□ 0.48
RFC1P35251 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.03■□□□□ 0.48
RFC1P35251 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RFC1P35251 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RFC1P35251 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFC1P35251 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFC1P35251 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RFC1P35251 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.02■□□□□ 0.48
RFC1P35251 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RFC1P35251 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFC1P35251 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms