Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFC4P35249 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RFC4P35249 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFC4P35249 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFC4P35249 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC21.3■■□□□ 1
RFC4P35249 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC21.3■■□□□ 1
RFC4P35249 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.3■■□□□ 1
RFC4P35249 AC142381.1-201ENST00000426099 345 ntBASIC21.3■■□□□ 1
RFC4P35249 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC21.3■■□□□ 1
RFC4P35249 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC21.3■■□□□ 1
RFC4P35249 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.3■■□□□ 1
RFC4P35249 SSH2-210ENST00000582084 560 ntTSL 3 BASIC21.3■■□□□ 1
RFC4P35249 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC21.3■■□□□ 1
RFC4P35249 AC007967.4-201ENST00000614700 386 ntBASIC21.3■■□□□ 1
RFC4P35249 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFC4P35249 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.3■■□□□ 1
RFC4P35249 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC21.3■■□□□ 1
RFC4P35249 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFC4P35249 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.3■■□□□ 1
RFC4P35249 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
RFC4P35249 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFC4P35249 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.3■■□□□ 1
RFC4P35249 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC21.29■■□□□ 1
RFC4P35249 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.29■■□□□ 1
RFC4P35249 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.29■■□□□ 1
RFC4P35249 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.29■■□□□ 1
RFC4P35249 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFC4P35249 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.29■■□□□ 1
RFC4P35249 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.29■■□□□ 1
RFC4P35249 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RFC4P35249 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
RFC4P35249 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.29■■□□□ 1
RFC4P35249 ATP5G2P4-201ENST00000442175 420 ntBASIC21.29■■□□□ 1
RFC4P35249 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.29■■□□□ 1
RFC4P35249 AC105233.2-201ENST00000523697 349 ntBASIC21.29■■□□□ 1
RFC4P35249 AF228730.5-201ENST00000530288 346 ntBASIC21.29■■□□□ 1
RFC4P35249 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFC4P35249 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.29■■□□□ 1
RFC4P35249 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFC4P35249 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RFC4P35249 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFC4P35249 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.29■■□□□ 1
RFC4P35249 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFC4P35249 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.29■■□□□ 1
RFC4P35249 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFC4P35249 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
RFC4P35249 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RFC4P35249 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFC4P35249 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFC4P35249 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFC4P35249 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFC4P35249 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC21.28■■□□□ 1
RFC4P35249 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RFC4P35249 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RFC4P35249 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RFC4P35249 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFC4P35249 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.28■■□□□ 1
RFC4P35249 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFC4P35249 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
RFC4P35249 AL138781.2-201ENST00000617896 1843 ntBASIC21.28■■□□□ 1
RFC4P35249 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RFC4P35249 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFC4P35249 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC21.28■■□□□ 1
RFC4P35249 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC21.28■■□□□ 1
RFC4P35249 TMPRSS11CP-201ENST00000453277 683 ntBASIC21.28■■□□□ 1
RFC4P35249 SATB1-217ENST00000493952 626 ntTSL 3 BASIC21.28■■□□□ 1
RFC4P35249 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC21.28■■□□□ 1
RFC4P35249 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC21.28■■□□□ 1
RFC4P35249 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC21.28■■□□□ 1
RFC4P35249 CDK4-206ENST00000549606 558 ntTSL 2 BASIC21.28■■□□□ 1
RFC4P35249 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC21.28■■□□□ 1
RFC4P35249 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
RFC4P35249 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RFC4P35249 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
RFC4P35249 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RFC4P35249 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RFC4P35249 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
RFC4P35249 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFC4P35249 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFC4P35249 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC21.28■■□□□ 1
RFC4P35249 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.28■■□□□ 1
RFC4P35249 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFC4P35249 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.27■■□□□ 1
RFC4P35249 HLA-V-204ENST00000476601 1289 ntBASIC21.27■■□□□ 1
RFC4P35249 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RFC4P35249 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC21.27■■□□□ 1
RFC4P35249 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC21.27■■□□□ 1
RFC4P35249 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
RFC4P35249 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFC4P35249 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.27■■□□□ 1
RFC4P35249 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.27■■□□□ 1
RFC4P35249 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.27■■□□□ 1
RFC4P35249 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFC4P35249 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RFC4P35249 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RFC4P35249 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RFC4P35249 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.27■□□□□ 0.99
RFC4P35249 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.26■□□□□ 0.99
RFC4P35249 AC131009.4-201ENST00000624048 1740 ntBASIC21.26■□□□□ 0.99
RFC4P35249 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms