Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC009533.2-201ENST00000543664 586 ntBASIC18.11■□□□□ 0.49
CTNNA1P35221 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTNNA1P35221 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.11■□□□□ 0.49
CTNNA1P35221 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.11■□□□□ 0.49
CTNNA1P35221 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CTNNA1P35221 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.11■□□□□ 0.49
CTNNA1P35221 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.11■□□□□ 0.49
CTNNA1P35221 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTNNA1P35221 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.11■□□□□ 0.49
CTNNA1P35221 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
CTNNA1P35221 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTNNA1P35221 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CTNNA1P35221 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.11■□□□□ 0.49
CTNNA1P35221 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.11■□□□□ 0.49
CTNNA1P35221 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTNNA1P35221 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTNNA1P35221 AC079328.2-201ENST00000561241 3354 ntBASIC18.1■□□□□ 0.49
CTNNA1P35221 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTNNA1P35221 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTNNA1P35221 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTNNA1P35221 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTNNA1P35221 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CTNNA1P35221 AC132938.5-201ENST00000624980 1813 ntBASIC18.1■□□□□ 0.49
CTNNA1P35221 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTNNA1P35221 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTNNA1P35221 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTNNA1P35221 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTNNA1P35221 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.1■□□□□ 0.49
CTNNA1P35221 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTNNA1P35221 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTNNA1P35221 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTNNA1P35221 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTNNA1P35221 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.1■□□□□ 0.49
CTNNA1P35221 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.1■□□□□ 0.49
CTNNA1P35221 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTNNA1P35221 STK19B-204ENST00000512515 211 ntBASIC18.1■□□□□ 0.49
CTNNA1P35221 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.1■□□□□ 0.49
CTNNA1P35221 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
CTNNA1P35221 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.1■□□□□ 0.49
CTNNA1P35221 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.1■□□□□ 0.49
CTNNA1P35221 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.1■□□□□ 0.49
CTNNA1P35221 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CTNNA1P35221 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
CTNNA1P35221 AC011467.2-201ENST00000598425 242 ntBASIC18.1■□□□□ 0.49
CTNNA1P35221 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.1■□□□□ 0.49
CTNNA1P35221 AD001527.2-201ENST00000622994 785 ntBASIC18.1■□□□□ 0.49
CTNNA1P35221 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CTNNA1P35221 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTNNA1P35221 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTNNA1P35221 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.1■□□□□ 0.49
CTNNA1P35221 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTNNA1P35221 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.1■□□□□ 0.49
CTNNA1P35221 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.1■□□□□ 0.49
CTNNA1P35221 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTNNA1P35221 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTNNA1P35221 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CTNNA1P35221 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.09■□□□□ 0.49
CTNNA1P35221 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTNNA1P35221 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CTNNA1P35221 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTNNA1P35221 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTNNA1P35221 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.09■□□□□ 0.49
CTNNA1P35221 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTNNA1P35221 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.09■□□□□ 0.49
CTNNA1P35221 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.09■□□□□ 0.49
CTNNA1P35221 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTNNA1P35221 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.09■□□□□ 0.49
CTNNA1P35221 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CTNNA1P35221 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTNNA1P35221 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.09■□□□□ 0.49
CTNNA1P35221 AC003669.1-201ENST00000334569 611 ntBASIC18.09■□□□□ 0.49
CTNNA1P35221 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.09■□□□□ 0.49
CTNNA1P35221 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.09■□□□□ 0.49
CTNNA1P35221 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTNNA1P35221 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTNNA1P35221 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.09■□□□□ 0.49
CTNNA1P35221 AP005901.3-202ENST00000581653 237 ntBASIC18.09■□□□□ 0.49
CTNNA1P35221 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.09■□□□□ 0.49
CTNNA1P35221 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTNNA1P35221 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTNNA1P35221 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTNNA1P35221 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CTNNA1P35221 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTNNA1P35221 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTNNA1P35221 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.09■□□□□ 0.49
CTNNA1P35221 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTNNA1P35221 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTNNA1P35221 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTNNA1P35221 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTNNA1P35221 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.09■□□□□ 0.49
CTNNA1P35221 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.08■□□□□ 0.49
CTNNA1P35221 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTNNA1P35221 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.08■□□□□ 0.49
CTNNA1P35221 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CTNNA1P35221 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CTNNA1P35221 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CTNNA1P35221 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.08■□□□□ 0.49
CTNNA1P35221 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.08■□□□□ 0.49
CTNNA1P35221 AL391005.1-201ENST00000623953 2435 ntBASIC18.08■□□□□ 0.49
CTNNA1P35221 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms